Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.2□□□□□ -1.9
NPAS2Q99743 MIR3200-201ENST00000580767 85 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 MTATP6P2-201ENST00000603319 678 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AP000238.1-201ENST00000608759 426 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 AP005137.2-201ENST00000609238 400 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 AC139713.2-210ENST00000641741 992 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 MTND5P1-201ENST00000445440 1375 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.2□□□□□ -1.9
NPAS2Q99743 SGO1P2-201ENST00000429458 1589 ntBASIC3.2□□□□□ -1.9
NPAS2Q99743 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPAS2Q99743 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NPAS2Q99743 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPAS2Q99743 HMGB1P5-201ENST00000255320 642 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NPAS2Q99743 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 MIR483-201ENST00000385070 76 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC007899.1-201ENST00000412776 775 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AL136133.1-201ENST00000413694 376 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AC092634.6-201ENST00000418558 192 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 OR1AA1P-201ENST00000419597 916 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 Z93242.1-201ENST00000427102 353 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 CST9LP2-201ENST00000437612 320 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AL445669.2-201ENST00000454425 421 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC112198.1-201ENST00000505369 1220 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AL391156.1-201ENST00000554965 554 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC010738.1-201ENST00000604970 987 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.19□□□□□ -1.9
NPAS2Q99743 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NPAS2Q99743 AC073346.2-201ENST00000624724 2058 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 AC093010.3-201ENST00000570269 15214 ntBASIC3.19□□□□□ -1.9
NPAS2Q99743 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NPAS2Q99743 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 RNU6-1074P-201ENST00000383995 104 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 RNA5SP120-201ENST00000410900 112 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 KRR1P1-201ENST00000419430 803 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.18□□□□□ -1.9
NPAS2Q99743 RABEPKP1-201ENST00000440529 1026 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 ARPC3P2-201ENST00000457786 533 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC017015.1-201ENST00000477387 286 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AC023632.1-201ENST00000518463 375 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.18□□□□□ -1.9
NPAS2Q99743 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC008127.2-201ENST00000549925 1075 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC005476.1-201ENST00000554427 397 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.18□□□□□ -1.9
NPAS2Q99743 VN1R87P-201ENST00000596706 487 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC011816.2-201ENST00000607089 556 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AC120053.1-201ENST00000607706 736 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC084824.5-201ENST00000612009 413 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC095031.1-201ENST00000623685 672 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NPAS2Q99743 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
NPAS2Q99743 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NPAS2Q99743 ZNF807-201ENST00000328088 1707 ntBASIC3.18□□□□□ -1.9
NPAS2Q99743 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms