Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
IFT140Q96RY7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.66□□□□□ -1.82
IFT140Q96RY7 AC124916.1-201ENST00000444020 547 ntBASIC3.66□□□□□ -1.82
IFT140Q96RY7 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
IFT140Q96RY7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.66□□□□□ -1.82
IFT140Q96RY7 AL359198.2-201ENST00000611836 194 ntBASIC3.66□□□□□ -1.82
IFT140Q96RY7 AC016542.2-201ENST00000624201 619 ntBASIC3.66□□□□□ -1.82
IFT140Q96RY7 AC097714.1-201ENST00000511272 1647 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 MIR489-201ENST00000384923 84 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 LUZP4P1-201ENST00000415420 344 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.65□□□□□ -1.83
IFT140Q96RY7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.65□□□□□ -1.83
IFT140Q96RY7 RPL36AP33-201ENST00000450395 310 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.65□□□□□ -1.83
IFT140Q96RY7 RPL23AP44-201ENST00000482216 473 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.65□□□□□ -1.83
IFT140Q96RY7 BX664608.1-201ENST00000610519 487 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 AC107871.2-201ENST00000612894 502 ntBASIC3.65□□□□□ -1.83
IFT140Q96RY7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.65□□□□□ -1.83
IFT140Q96RY7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
IFT140Q96RY7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.64□□□□□ -1.83
IFT140Q96RY7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
IFT140Q96RY7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.64□□□□□ -1.83
IFT140Q96RY7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.64□□□□□ -1.83
IFT140Q96RY7 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
IFT140Q96RY7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.64□□□□□ -1.83
IFT140Q96RY7 AC087385.1-201ENST00000475062 312 ntBASIC3.64□□□□□ -1.83
IFT140Q96RY7 AC092185.1-201ENST00000491371 97 ntBASIC3.64□□□□□ -1.83
IFT140Q96RY7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.64□□□□□ -1.83
IFT140Q96RY7 MFSD8-245ENST00000641743 948 ntBASIC3.64□□□□□ -1.83
IFT140Q96RY7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
IFT140Q96RY7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.64□□□□□ -1.83
IFT140Q96RY7 AC091152.2-201ENST00000591628 2569 ntBASIC3.63□□□□□ -1.83
IFT140Q96RY7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
IFT140Q96RY7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.63□□□□□ -1.83
IFT140Q96RY7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.63□□□□□ -1.83
IFT140Q96RY7 AC126177.3-201ENST00000551839 688 ntBASIC3.63□□□□□ -1.83
IFT140Q96RY7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.63□□□□□ -1.83
IFT140Q96RY7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.63□□□□□ -1.83
IFT140Q96RY7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.63□□□□□ -1.83
IFT140Q96RY7 AC092326.2-201ENST00000624772 1561 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 RNY1P10-201ENST00000363268 113 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 MIR499A-201ENST00000384903 122 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 USP9YP7-201ENST00000436723 430 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 USP9YP32-201ENST00000452432 430 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 AC012119.1-201ENST00000603184 222 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 MIR6132-201ENST00000622083 109 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 AC093591.3-201ENST00000634516 308 ntBASIC3.62□□□□□ -1.83
IFT140Q96RY7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
IFT140Q96RY7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.62□□□□□ -1.83
IFT140Q96RY7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.61□□□□□ -1.83
IFT140Q96RY7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
IFT140Q96RY7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
IFT140Q96RY7 MIR583-201ENST00000384846 75 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 RNU2-6P-201ENST00000411404 190 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.61□□□□□ -1.83
IFT140Q96RY7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
IFT140Q96RY7 OR4K11P-201ENST00000431829 904 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 AC244505.4-201ENST00000434905 287 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 SSXP5-201ENST00000443473 287 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 AC008126.1-201ENST00000549019 480 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 AC078814.3-201ENST00000553036 491 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 VN1R80P-201ENST00000597126 338 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.61□□□□□ -1.83
IFT140Q96RY7 AC008432.1-201ENST00000615912 1320 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
IFT140Q96RY7 AP005901.5-201ENST00000545779 1796 ntBASIC3.61□□□□□ -1.83
IFT140Q96RY7 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 AL139156.1-201ENST00000412785 841 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 RPS24P8-201ENST00000431490 402 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 CFTRP1-201ENST00000456646 183 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 OR1S1-201ENST00000624470 978 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
IFT140Q96RY7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
IFT140Q96RY7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
IFT140Q96RY7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.6□□□□□ -1.83
IFT140Q96RY7 RN7SKP226-201ENST00000364912 300 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 MIR142-201ENST00000384835 87 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 AC011753.1-201ENST00000451001 220 ntBASIC3.6□□□□□ -1.83
IFT140Q96RY7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms