Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RTL9Q8NET4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTL9Q8NET4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTL9Q8NET4 MTND5P6-201ENST00000422338 1798 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTL9Q8NET4 RNU6-225P-201ENST00000384613 103 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC104332.2-201ENST00000429959 156 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTL9Q8NET4 Z99127.2-201ENST00000441426 334 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 IFNA11P-201ENST00000446352 526 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 AL353705.4-201ENST00000449661 238 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 RPS27AP9-201ENST00000477681 438 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC078918.1-201ENST00000498515 228 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC034244.2-201ENST00000514668 858 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC239860.2-201ENST00000525886 270 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.98□□□□□ -1.93
RTL9Q8NET4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.98□□□□□ -1.93
RTL9Q8NET4 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
RTL9Q8NET4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTL9Q8NET4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RTL9Q8NET4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RTL9Q8NET4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RTL9Q8NET4 MIR142-201ENST00000384835 87 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 BTF3P7-201ENST00000407097 488 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 RN7SKP140-201ENST00000411196 284 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 RPL31P2-201ENST00000413849 377 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 AL158825.1-201ENST00000414735 521 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 MTCO2P17-201ENST00000424336 677 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 AC133134.1-201ENST00000466800 359 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RTL9Q8NET4 AC023050.1-201ENST00000498198 304 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 IGKV2-36-201ENST00000519999 223 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RTL9Q8NET4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 MTCO3P24-201ENST00000572729 782 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 MIR1273D-201ENST00000577266 86 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 YWHAQP7-201ENST00000603536 658 ntBASIC2.97□□□□□ -1.93
RTL9Q8NET4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL9Q8NET4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTL9Q8NET4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RTL9Q8NET4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC092447.7-201ENST00000422212 1621 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 SNORA41-201ENST00000384675 132 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 AL162578.1-201ENST00000406202 378 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC007064.1-201ENST00000412238 351 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 HMGN2P3-201ENST00000433603 273 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 HMGN2P5-201ENST00000436882 273 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 RPS12P2-201ENST00000439728 269 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 UBE2V2P4-201ENST00000447495 259 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 HMGN1P5-201ENST00000448591 263 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 VN1R17P-201ENST00000472048 1090 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 RNA5SP281-201ENST00000516504 135 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC021269.2-201ENST00000532318 330 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 MIR5007-201ENST00000583098 95 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
RTL9Q8NET4 AC121761.2-201ENST00000617300 689 ntBASIC2.96□□□□□ -1.94
RTL9Q8NET4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTL9Q8NET4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC093084.1-201ENST00000424233 687 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC009965.2-201ENST00000425328 970 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 AL591806.2-201ENST00000433122 173 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 NPM1P49-201ENST00000448027 714 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 RPL21P103-201ENST00000479921 488 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC026436.1-201ENST00000510537 270 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC026412.2-201ENST00000512270 1075 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC104986.1-201ENST00000517978 436 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC025281.1-201ENST00000567026 265 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 AL354950.1-201ENST00000614150 568 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTL9Q8NET4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RTL9Q8NET4 AC011978.2-201ENST00000569835 2054 ntBASIC2.95□□□□□ -1.94
RTL9Q8NET4 MTND4P34-201ENST00000572715 1371 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 RNU1-73P-201ENST00000383971 164 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms