Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 MIR1289-2-201ENST00000408360 111 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 AC005005.2-201ENST00000420779 380 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 TOMM20P4-201ENST00000427861 435 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 NEK4P1-201ENST00000433383 879 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 ATP5F1P1-201ENST00000433775 569 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 NPM1P49-201ENST00000448027 714 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 VN1R78P-201ENST00000597393 564 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 MIR7843-201ENST00000622274 79 ntBASIC3.33□□□□□ -1.88
VPS8Q8N3P4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS8Q8N3P4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC244517.1-201ENST00000606030 2086 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 SNORA11.4-201ENST00000408823 129 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC010881.1-201ENST00000433830 235 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC012170.1-201ENST00000495139 359 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 CCNHP1-201ENST00000513311 678 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 YWHAZP1-201ENST00000556286 722 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC090953.1-201ENST00000604305 1092 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AC004696.1-201ENST00000614345 607 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
VPS8Q8N3P4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS8Q8N3P4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 SNORD114-1-201ENST00000362705 72 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 MIR504-201ENST00000385065 83 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 HMGN2P3-201ENST00000433603 273 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 HMGN2P5-201ENST00000436882 273 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 HMGB3P21-201ENST00000452483 547 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 MTND4P2-201ENST00000507767 1203 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 RNU6-237P-201ENST00000515985 71 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC074029.1-201ENST00000552531 1044 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 MTND4P35-201ENST00000604257 1375 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC000367.1-201ENST00000452711 1766 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS8Q8N3P4 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 AC104454.1-201ENST00000421341 1401 ntBASIC3.31□□□□□ -1.88
VPS8Q8N3P4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS8Q8N3P4 RNA5SP167-201ENST00000365461 116 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 AC005517.2-201ENST00000424673 553 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 ELOCP10-201ENST00000440624 327 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 TVP23BP2-201ENST00000455082 615 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS8Q8N3P4 AC092436.1-201ENST00000506450 503 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 SNORD116-26-201ENST00000516006 96 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS8Q8N3P4 ELOCP34-201ENST00000604436 327 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 AC104237.2-201ENST00000612456 443 ntBASIC3.3□□□□□ -1.88
VPS8Q8N3P4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS8Q8N3P4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC003685.2-201ENST00000422795 395 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC129850.1-201ENST00000436203 508 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AL035551.1-201ENST00000446931 348 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC092451.1-201ENST00000480211 153 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 GAPDHP39-201ENST00000481866 979 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 GZMAP1-201ENST00000503054 631 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS8Q8N3P4 MIR4769-201ENST00000584126 77 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC078899.3-201ENST00000599065 212 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 AC067838.1-201ENST00000606064 577 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 ZNF271P-202ENST00000465539 1970 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS8Q8N3P4 GABPAP-201ENST00000419271 1356 ntBASIC3.29□□□□□ -1.88
VPS8Q8N3P4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS8Q8N3P4 MIR124-3-201ENST00000384866 87 ntBASIC3.28□□□□□ -1.88
VPS8Q8N3P4 SNRPGP3-201ENST00000469405 227 ntBASIC3.28□□□□□ -1.88
VPS8Q8N3P4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS8Q8N3P4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS8Q8N3P4 SMARCE1P4-201ENST00000523647 241 ntBASIC3.28□□□□□ -1.88
VPS8Q8N3P4 NTAN1P1-201ENST00000603150 646 ntBASIC3.28□□□□□ -1.88
VPS8Q8N3P4 ZNF720P1-201ENST00000562403 1939 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms