Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
BEST3Q8N1M1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.74□□□□□ -1.81
BEST3Q8N1M1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
BEST3Q8N1M1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.74□□□□□ -1.81
BEST3Q8N1M1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.74□□□□□ -1.81
BEST3Q8N1M1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.74□□□□□ -1.81
BEST3Q8N1M1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 OR11H5P-202ENST00000641612 1325 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL359837.1-201ENST00000381357 287 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 U3.29-201ENST00000391296 212 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC007742.1-201ENST00000425789 329 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 ELOCP26-201ENST00000436067 329 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 TBCAP1-201ENST00000436520 327 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 SDCBPP1-201ENST00000440192 890 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 TAF9P1-201ENST00000445421 515 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 HMGB1P15-201ENST00000453854 435 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 TAF9P2-201ENST00000454958 515 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 SNORA84-201ENST00000459229 133 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 RN7SL542P-201ENST00000467147 294 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 Y_RNA.695-201ENST00000516715 107 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 RNU4-60P-201ENST00000517239 135 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC024224.1-201ENST00000538284 609 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 OR6C73P-201ENST00000546432 358 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC107016.1-201ENST00000550463 337 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC024909.2-201ENST00000553035 286 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL353997.4-201ENST00000586196 166 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC004223.2-201ENST00000590309 544 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC040904.1-201ENST00000590850 223 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 U73023.1-201ENST00000603134 700 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AP000403.1-201ENST00000603349 851 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AL592436.1-201ENST00000605135 558 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC103710.4-201ENST00000609301 899 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC064801.1-201ENST00000612025 407 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC139792.2-201ENST00000624218 587 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC074029.4-201ENST00000624796 1859 ntBASIC3.73□□□□□ -1.81
BEST3Q8N1M1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 MAPK10-253ENST00000641010 4072 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL161781.1-201ENST00000354277 403 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 Y_RNA.51-201ENST00000362725 102 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 U3.4-201ENST00000363352 213 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RNU5F-7P-201ENST00000363696 115 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RNU6-343P-201ENST00000364709 104 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RNA5SP56-201ENST00000410277 118 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 BTF3L4P1-201ENST00000413813 468 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CYCSP46-201ENST00000423569 204 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 VN1R108P-201ENST00000431580 830 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RPL37P21-201ENST00000435890 276 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL360221.1-201ENST00000445989 335 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 Z95327.1-201ENST00000446082 482 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 EPS15P1-201ENST00000448836 336 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RPS11P1-201ENST00000451072 473 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC068724.1-201ENST00000487100 792 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 TXNP6-201ENST00000510190 310 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC034159.1-201ENST00000513885 583 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 RNU7-143P-201ENST00000516781 65 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 OR4R3P-201ENST00000525084 838 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC013828.2-201ENST00000532487 235 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC023161.2-201ENST00000551218 780 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms