Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RN7SL132P-201ENST00000478131 296 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AP001804.3-201ENST00000525146 880 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 ZNF321P-202ENST00000550843 495 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AL360157.1-201ENST00000565962 87 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC002400.1-201ENST00000569310 726 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC120057.2-201ENST00000571520 271 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC053481.4-201ENST00000583164 216 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 SNORA51-201ENST00000606420 132 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AL136981.2-201ENST00000617319 734 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC017037.3-201ENST00000625016 472 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC010733.2-201ENST00000589496 5702 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 AC090740.1-201ENST00000623193 2262 ntBASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
NUP54Q7Z3B4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 RNA5SP399-201ENST00000364003 117 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 SNORA4.1-201ENST00000364263 144 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 RNA5SP97-201ENST00000365006 84 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 SNORA57.1-201ENST00000391227 145 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 RNU2-15P-201ENST00000410692 191 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 GLRXP1-201ENST00000423261 334 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC087650.1-201ENST00000431445 468 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AL121871.1-201ENST00000443413 436 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 ARPC3P5-201ENST00000448802 534 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AL109741.2-201ENST00000455561 343 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 MTCO2P6-201ENST00000463134 685 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC093278.1-201ENST00000494700 600 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC147055.4-201ENST00000504399 745 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC093281.2-201ENST00000510153 597 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 DUXAP5-201ENST00000529668 529 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AL139174.1-201ENST00000531489 886 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 YPEL5P3-201ENST00000547227 352 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC022916.3-201ENST00000592961 742 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 NIFKP6-201ENST00000598115 845 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 VN1R85P-201ENST00000601587 426 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 ELOCP35-201ENST00000604289 336 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AP001330.4-201ENST00000604350 154 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC024941.1-201ENST00000612250 334 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 AC091925.2-201ENST00000625059 256 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 ZNF542P-204ENST00000482727 1305 ntBASIC3.63□□□□□ -1.83
NUP54Q7Z3B4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 ZNF807-201ENST00000328088 1707 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC110774.1-201ENST00000623567 2018 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 RNA5SP515-201ENST00000364570 118 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 MIR1193-201ENST00000408109 78 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC109780.2-201ENST00000413467 845 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC107081.1-201ENST00000414975 361 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms