Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.07
RIF1Q5UIP0 KPNA2P1-201ENST00000458289 1591 ntBASIC2.09□□□□□ -2.07
RIF1Q5UIP0 MTND4P10-201ENST00000446199 1363 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 SNORA25.6-201ENST00000364121 118 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.09□□□□□ -2.08
RIF1Q5UIP0 RPL21P71-201ENST00000465598 459 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 AC107398.1-201ENST00000486904 505 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.09□□□□□ -2.08
RIF1Q5UIP0 OR4A45P-201ENST00000529954 901 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 AC010546.1-201ENST00000569391 485 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.09□□□□□ -2.08
RIF1Q5UIP0 AC108479.2-201ENST00000617314 601 ntBASIC2.09□□□□□ -2.08
RIF1Q5UIP0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 RPS20P25-201ENST00000412447 352 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL034379.1-201ENST00000423216 253 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 MRPL50P4-201ENST00000446432 475 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL451074.6-201ENST00000608512 729 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL158196.1-201ENST00000616786 434 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL356266.1-201ENST00000623311 483 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 HMGB3P23-201ENST00000414981 585 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL118520.1-201ENST00000450770 291 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AC147055.1-201ENST00000509261 750 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 snoZ278.1-201ENST00000517059 112 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AL731537.2-201ENST00000561565 951 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 HMGN2P28-201ENST00000606102 262 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AC126118.1-201ENST00000607744 628 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 AC095038.3-201ENST00000634439 195 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 FRG1DP-201ENST00000635586 771 ntBASIC2.08□□□□□ -2.08
RIF1Q5UIP0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
RIF1Q5UIP0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 Y_RNA.205-201ENST00000364128 113 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC021146.1-201ENST00000511202 716 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AL365503.1-201ENST00000605247 905 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 MIR6515-201ENST00000619843 57 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AL359715.5-201ENST00000623431 443 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 RNA5SP456-201ENST00000364002 114 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 Y_RNA.295-201ENST00000364918 102 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC009238.1-201ENST00000442165 424 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC009237.6-201ENST00000446969 424 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC011037.1-201ENST00000483964 558 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 RPL23AP63-201ENST00000498752 471 ntBASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.07□□□□□ -2.08
RIF1Q5UIP0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AC011978.2-201ENST00000569835 2054 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 API5P2-201ENST00000397055 1498 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 RN7SKP285-201ENST00000410137 318 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 UBE2V1P5-201ENST00000440070 405 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 RPS4XP11-201ENST00000446897 772 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 FGF7P3-201ENST00000454645 303 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 NAMPTP2-201ENST00000505629 1115 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 MTCYBP20-201ENST00000524239 1129 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AL355578.1-201ENST00000607405 1328 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 MIR21-201ENST00000362134 72 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 RNU1-57P-201ENST00000384491 166 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AC009237.2-201ENST00000421358 284 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 RNU1-123P-201ENST00000458950 160 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 RNU7-95P-201ENST00000459222 64 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.06□□□□□ -2.08
RIF1Q5UIP0 WISP1-OT1-201ENST00000602893 642 ntBASIC2.06□□□□□ -2.08
RIF1Q5UIP0 AC091834.1-201ENST00000614543 472 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms