Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RPS29P10-201ENST00000439197 166 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RPL23AP89-201ENST00000439324 255 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC112492.4-201ENST00000456549 352 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 HMGB3P30-201ENST00000457863 606 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RPL7P5-201ENST00000471472 736 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 FO393415.2-201ENST00000480085 343 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 UBA52P3-201ENST00000491303 382 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 COX6B1P5-201ENST00000509843 249 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RNU6-202P-201ENST00000515998 96 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RNU4-77P-201ENST00000516692 156 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 SCARNA20.4-201ENST00000516969 131 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 IGKV1-32-201ENST00000519290 311 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC068790.3-201ENST00000602988 553 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC010201.1-201ENST00000605051 540 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 SNORD58B-201ENST00000607313 66 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC073869.10-201ENST00000642016 354 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 AC244517.1-201ENST00000606030 2086 ntBASIC6.65□□□□□ -1.35
RC3H1Q5TC82 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RC3H1Q5TC82 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.478-201ENST00000384358 107 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL356421.1-201ENST00000403255 413 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 LINC02210-201ENST00000444561 288 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL035551.1-201ENST00000446931 348 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 MTCO3P44-201ENST00000510977 541 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.670-201ENST00000516255 105 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.673-201ENST00000516306 88 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL137161.1-201ENST00000532231 390 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 Z98751.3-201ENST00000604447 521 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AL606534.2-204ENST00000635008 178 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 AC009962.1-201ENST00000567327 3813 ntBASIC6.64□□□□□ -1.35
RC3H1Q5TC82 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RC3H1Q5TC82 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 SNORD113-1-201ENST00000365321 69 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 SNORD56.6-201ENST00000384569 71 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 RNU2-50P-201ENST00000410494 143 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 CDC27P2-201ENST00000425026 1922 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC105402.2-201ENST00000438503 358 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC114495.1-201ENST00000441274 436 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 PCMTD1P1-201ENST00000455560 355 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms