Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 Y_RNA.238-201ENST00000364441 102 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 SNORA51.9-201ENST00000384295 124 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 RNU4-30P-201ENST00000410245 143 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 RPS12P23-201ENST00000419579 400 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 AL358176.3-201ENST00000420757 454 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 AC005002.2-201ENST00000438228 269 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 NXT1P1-201ENST00000458481 316 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 PPIAP19-201ENST00000486414 492 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 RNA5SP76-201ENST00000516277 87 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 AC060775.1-201ENST00000518241 520 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 AC090022.1-201ENST00000546569 311 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 FKBP1BP1-201ENST00000553366 325 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 CYCSP38-201ENST00000559840 322 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 SNORD39.2-201ENST00000579995 76 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 AC004825.2-201ENST00000616634 455 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 FAM27E2-201ENST00000619668 403 ntBASIC6.72□□□□□ -1.33
VARS2Q5ST30 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.72□□□□□ -1.33
VARS2Q5ST30 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARS2Q5ST30 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.33
VARS2Q5ST30 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VARS2Q5ST30 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.71□□□□□ -1.33
VARS2Q5ST30 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
VARS2Q5ST30 AC007342.5-201ENST00000571340 2142 ntBASIC6.71□□□□□ -1.33
VARS2Q5ST30 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.71□□□□□ -1.33
VARS2Q5ST30 AC025809.2-201ENST00000625085 1802 ntBASIC6.71□□□□□ -1.33
VARS2Q5ST30 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.71□□□□□ -1.33
VARS2Q5ST30 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARS2Q5ST30 MIR323A-201ENST00000362199 86 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 RNU6-512P-201ENST00000364438 103 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 RNU4-56P-201ENST00000364700 142 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC234779.1-201ENST00000425910 285 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 RPL12P17-201ENST00000432393 498 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 PPIAP7-201ENST00000454070 489 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 U8.22-201ENST00000459141 133 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 PLGLA-201ENST00000465668 449 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC092824.1-201ENST00000483524 576 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 MTND6P8-201ENST00000503471 522 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 RNU6-612P-201ENST00000516909 102 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 AP000620.1-201ENST00000527147 504 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARS2Q5ST30 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 CYCSP1-201ENST00000604815 315 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC092266.1-201ENST00000610958 165 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 MIR7159-201ENST00000620587 66 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 CR392039.4-201ENST00000624968 501 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 snoZ196.1-201ENST00000625269 89 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 AL596275.2-208ENST00000641192 594 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARS2Q5ST30 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.71□□□□□ -1.34
VARS2Q5ST30 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARS2Q5ST30 AC110491.1-201ENST00000562191 2010 ntBASIC6.71□□□□□ -1.34
VARS2Q5ST30 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 AL137058.3-201ENST00000624531 3099 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARS2Q5ST30 MIR410-201ENST00000362222 80 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 RNU6-989P-201ENST00000362756 107 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 Y_RNA.136-201ENST00000363444 102 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 SNORA46.1-201ENST00000391069 153 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 RN7SKP159-201ENST00000410657 292 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 U3.43-201ENST00000410734 213 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 RNU7-87P-201ENST00000459343 62 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 AC006511.1-201ENST00000470614 315 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 HMGB3P3-201ENST00000510526 400 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 DEFB131C-201ENST00000528817 165 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.7□□□□□ -1.34
VARS2Q5ST30 RPL21P9-201ENST00000556149 474 ntBASIC6.7□□□□□ -1.34
VARS2Q5ST30 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms