Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL662874.1-201ENST00000426065 230 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC093106.2-201ENST00000428212 385 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 CALM2P2-201ENST00000428512 440 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 OR6D1P-201ENST00000436165 939 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RPL7P28-201ENST00000437739 740 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 PPIAP3-201ENST00000450588 505 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RPL10P17-201ENST00000453852 316 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC099560.2-201ENST00000457554 255 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RN7SL583P-201ENST00000475692 287 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AP000797.2-201ENST00000475768 606 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RPL23AP55-201ENST00000498163 452 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 SNORD46.2-201ENST00000516021 102 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RNU6-1016P-201ENST00000516689 94 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 AP000676.2-201ENST00000529711 301 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RANP3-201ENST00000530970 276 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDH1Q08174 TVP23CP2-201ENST00000571473 623 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDH1Q08174 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDH1Q08174 AC073539.2-201ENST00000597113 165 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC007566.2-201ENST00000603642 413 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC010632.3-201ENST00000611377 369 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC007485.1-201ENST00000616755 206 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 MIR6729-201ENST00000618194 65 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 CU639417.4-201ENST00000623928 207 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 AP001029.2-203ENST00000589795 4910 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 AL031119.1-201ENST00000404707 1879 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 OR55B1P-203ENST00000641518 2602 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC100757.1-201ENST00000616872 1835 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.34□□□□□ -1.56
PCDH1Q08174 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PCDH1Q08174 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PCDH1Q08174 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 PNPT1P2-201ENST00000456768 2050 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH1Q08174 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDH1Q08174 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH1Q08174 SNORD3E-201ENST00000362899 217 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 Y_RNA.252-201ENST00000364556 101 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 Y_RNA.364-201ENST00000365532 101 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RNU6-890P-201ENST00000384121 107 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 Y_RNA.527-201ENST00000384573 102 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AL109755.1-201ENST00000401791 649 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RNU2-50P-201ENST00000410494 143 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RNU4-25P-201ENST00000410569 230 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RNU6-603P-201ENST00000411403 107 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 HMGB3P2-201ENST00000411913 584 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AL133482.1-201ENST00000415988 498 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RPS15AP40-201ENST00000419621 391 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH1Q08174 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 RPS29P14-201ENST00000431518 171 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RPL21P112-201ENST00000434403 463 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH1Q08174 RPL12P25-201ENST00000455592 494 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AC007998.1-201ENST00000474156 672 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RPS27AP1-201ENST00000475545 471 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RPL7P51-201ENST00000490532 749 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDH1Q08174 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 RNA5SP230-201ENST00000517039 122 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 DEFB108D-201ENST00000527787 222 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH1Q08174 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH1Q08174 SETP7-201ENST00000552169 453 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 MTCO3P23-201ENST00000561363 289 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 AC106782.4-201ENST00000568264 210 ntBASIC5.33□□□□□ -1.56
PCDH1Q08174 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms