Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LTBQ06643 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LTBQ06643 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
LTBQ06643 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LTBQ06643 AC007529.1-201ENST00000418574 2178 ntBASIC3.85□□□□□ -1.79
LTBQ06643 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.85□□□□□ -1.79
LTBQ06643 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 AC114546.3-201ENST00000623582 1734 ntBASIC3.84□□□□□ -1.79
LTBQ06643 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.84□□□□□ -1.79
LTBQ06643 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LTBQ06643 Y_RNA.256-201ENST00000364594 104 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RNA5SP366-201ENST00000365454 123 ntBASIC3.84□□□□□ -1.79
LTBQ06643 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LTBQ06643 RNU6ATAC-201ENST00000408749 126 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RNU2-65P-201ENST00000410162 185 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RN7SKP235-201ENST00000410662 305 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.84□□□□□ -1.79
LTBQ06643 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.84□□□□□ -1.79
LTBQ06643 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 AC083875.1-201ENST00000419509 405 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 AC233981.1-201ENST00000423224 461 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RBMY1KP-201ENST00000423480 476 ntBASIC3.84□□□□□ -1.79
LTBQ06643 EIF1P3-201ENST00000423841 334 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.84□□□□□ -1.79
LTBQ06643 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 NANOGP6-201ENST00000429190 847 ntBASIC3.84□□□□□ -1.79
LTBQ06643 ELOCP18-201ENST00000434209 337 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC007389.2-201ENST00000434630 306 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RPS26P40-201ENST00000435209 294 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RPL37P21-201ENST00000435890 276 ntBASIC3.84□□□□□ -1.79
LTBQ06643 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.84□□□□□ -1.79
LTBQ06643 HMGB3P9-201ENST00000441799 583 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 WASF1P1-201ENST00000447560 1131 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC239809.1-201ENST00000450470 217 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RPL23AP81-201ENST00000455252 467 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RPL37P3-201ENST00000456825 293 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.84□□□□□ -1.79
LTBQ06643 AC097493.1-201ENST00000463958 372 ntBASIC3.84□□□□□ -1.79
LTBQ06643 RN7SL691P-201ENST00000494487 301 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC114981.1-201ENST00000503897 678 ntBASIC3.84□□□□□ -1.79
LTBQ06643 FAM92A1P2-202ENST00000504766 877 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 ARL2BPP6-201ENST00000512757 439 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AF186190.1-201ENST00000517470 480 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.84□□□□□ -1.79
LTBQ06643 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.84□□□□□ -1.79
LTBQ06643 AP000790.1-201ENST00000528891 737 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC013828.2-201ENST00000532487 235 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC068446.3-201ENST00000555285 382 ntBASIC3.84□□□□□ -1.79
LTBQ06643 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.84□□□□□ -1.79
LTBQ06643 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LTBQ06643 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 LARP7P1-201ENST00000605576 316 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC097468.3-201ENST00000607956 456 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC004067.1-201ENST00000608733 700 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC131902.3-201ENST00000611767 581 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC104010.1-201ENST00000616889 150 ntBASIC3.84□□□□□ -1.79
LTBQ06643 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 CR381653.2-201ENST00000624041 768 ntBASIC3.84□□□□□ -1.79
LTBQ06643 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 AC116563.2-201ENST00000624751 535 ntBASIC3.84□□□□□ -1.79
LTBQ06643 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 AC140479.6-201ENST00000633535 357 ntBASIC3.84□□□□□ -1.79
LTBQ06643 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.84□□□□□ -1.79
LTBQ06643 OR4G11P-202ENST00000642116 1414 ntBASIC3.84□□□□□ -1.79
LTBQ06643 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.84□□□□□ -1.8
LTBQ06643 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.84□□□□□ -1.8
LTBQ06643 AC068254.2-201ENST00000623938 3577 ntBASIC3.84□□□□□ -1.8
LTBQ06643 AL158163.1-201ENST00000603915 1649 ntBASIC3.84□□□□□ -1.8
LTBQ06643 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
LTBQ06643 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
LTBQ06643 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 AC106871.1-201ENST00000568324 3102 ntBASIC3.83□□□□□ -1.8
LTBQ06643 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LTBQ06643 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LTBQ06643 MIR372-201ENST00000362225 67 ntBASIC3.83□□□□□ -1.8
LTBQ06643 RNU6-777P-201ENST00000364265 104 ntBASIC3.83□□□□□ -1.8
LTBQ06643 RNU4-12P-201ENST00000365233 139 ntBASIC3.83□□□□□ -1.8
LTBQ06643 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.83□□□□□ -1.8
LTBQ06643 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.83□□□□□ -1.8
LTBQ06643 MIR181A1-201ENST00000385026 110 ntBASIC3.83□□□□□ -1.8
LTBQ06643 U8.14-201ENST00000390843 143 ntBASIC3.83□□□□□ -1.8
LTBQ06643 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LTBQ06643 SNRPEP2-201ENST00000397592 279 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms