Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 WBP1LP4-201ENST00000505043 344 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM3P62310 AC004062.1-201ENST00000509926 645 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM3P62310 IGKV2D-36-201ENST00000518643 226 ntBASIC2.09□□□□□ -2.07
LSM3P62310 OR4R1P-201ENST00000529879 463 ntBASIC2.09□□□□□ -2.07
LSM3P62310 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM3P62310 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM3P62310 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM3P62310 AC107954.1-201ENST00000565906 727 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.09□□□□□ -2.07
LSM3P62310 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM3P62310 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM3P62310 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.09□□□□□ -2.07
LSM3P62310 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.09□□□□□ -2.07
LSM3P62310 AC010620.2-201ENST00000600135 313 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AL133507.1-201ENST00000605269 557 ntBASIC2.09□□□□□ -2.07
LSM3P62310 U73479.1-201ENST00000618062 168 ntBASIC2.09□□□□□ -2.07
LSM3P62310 AC015967.1-201ENST00000619893 476 ntBASIC2.09□□□□□ -2.07
LSM3P62310 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.08□□□□□ -2.08
LSM3P62310 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LSM3P62310 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LSM3P62310 RNA5SP252-201ENST00000391131 119 ntBASIC2.08□□□□□ -2.08
LSM3P62310 UBA52P6-201ENST00000399822 382 ntBASIC2.08□□□□□ -2.08
LSM3P62310 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
LSM3P62310 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.08□□□□□ -2.08
LSM3P62310 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.08□□□□□ -2.08
LSM3P62310 RPS24P13-201ENST00000442520 397 ntBASIC2.08□□□□□ -2.08
LSM3P62310 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.08□□□□□ -2.08
LSM3P62310 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.08□□□□□ -2.08
LSM3P62310 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
LSM3P62310 CCNHP1-201ENST00000513311 678 ntBASIC2.08□□□□□ -2.08
LSM3P62310 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.08□□□□□ -2.08
LSM3P62310 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.08□□□□□ -2.08
LSM3P62310 AC121758.2-201ENST00000553271 193 ntBASIC2.08□□□□□ -2.08
LSM3P62310 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.08□□□□□ -2.08
LSM3P62310 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.08□□□□□ -2.08
LSM3P62310 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.08□□□□□ -2.08
LSM3P62310 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.08□□□□□ -2.08
LSM3P62310 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.08□□□□□ -2.08
LSM3P62310 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.08□□□□□ -2.08
LSM3P62310 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.08□□□□□ -2.08
LSM3P62310 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.08□□□□□ -2.08
LSM3P62310 AL122126.1-201ENST00000546905 1318 ntBASIC2.08□□□□□ -2.08
LSM3P62310 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LSM3P62310 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
LSM3P62310 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.07□□□□□ -2.08
LSM3P62310 PABPC1P7-201ENST00000413177 1513 ntBASIC2.07□□□□□ -2.08
LSM3P62310 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM3P62310 SNORA38.1-201ENST00000364172 131 ntBASIC2.07□□□□□ -2.08
LSM3P62310 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.07□□□□□ -2.08
LSM3P62310 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
LSM3P62310 PTMAP2-201ENST00000397627 327 ntBASIC2.07□□□□□ -2.08
LSM3P62310 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LSM3P62310 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM3P62310 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
LSM3P62310 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.07□□□□□ -2.08
LSM3P62310 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.07□□□□□ -2.08
LSM3P62310 AC069157.1-201ENST00000421749 137 ntBASIC2.07□□□□□ -2.08
LSM3P62310 HMGN2P30-201ENST00000423237 256 ntBASIC2.07□□□□□ -2.08
LSM3P62310 SUMO1P4-201ENST00000429430 302 ntBASIC2.07□□□□□ -2.08
LSM3P62310 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.07□□□□□ -2.08
LSM3P62310 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.07□□□□□ -2.08
LSM3P62310 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM3P62310 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.07□□□□□ -2.08
LSM3P62310 HMGB1P48-201ENST00000446155 598 ntBASIC2.07□□□□□ -2.08
LSM3P62310 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.07□□□□□ -2.08
LSM3P62310 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.07□□□□□ -2.08
LSM3P62310 C1DP3-201ENST00000455013 423 ntBASIC2.07□□□□□ -2.08
LSM3P62310 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.07□□□□□ -2.08
LSM3P62310 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
LSM3P62310 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM3P62310 RPL32P34-201ENST00000486380 400 ntBASIC2.07□□□□□ -2.08
LSM3P62310 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.07□□□□□ -2.08
LSM3P62310 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.07□□□□□ -2.08
LSM3P62310 XKRY-201ENST00000510392 1100 ntBASIC2.07□□□□□ -2.08
LSM3P62310 RAC1P5-201ENST00000512182 576 ntBASIC2.07□□□□□ -2.08
LSM3P62310 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
LSM3P62310 DNAJC8P1-201ENST00000554535 372 ntBASIC2.07□□□□□ -2.08
LSM3P62310 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
LSM3P62310 AC106791.2-201ENST00000604680 391 ntBASIC2.07□□□□□ -2.08
LSM3P62310 HSPE1P14-201ENST00000605812 302 ntBASIC2.07□□□□□ -2.08
LSM3P62310 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
LSM3P62310 AL354950.1-201ENST00000614150 568 ntBASIC2.07□□□□□ -2.08
LSM3P62310 MTCO1P6-201ENST00000481192 1384 ntBASIC2.07□□□□□ -2.08
LSM3P62310 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM3P62310 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LSM3P62310 AC010680.1-201ENST00000590024 3590 ntBASIC2.06□□□□□ -2.08
LSM3P62310 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
LSM3P62310 AC116096.1-201ENST00000566804 2314 ntBASIC2.06□□□□□ -2.08
LSM3P62310 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LSM3P62310 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LSM3P62310 NACA3P-201ENST00000359690 648 ntBASIC2.06□□□□□ -2.08
LSM3P62310 RNU1-64P-201ENST00000365443 163 ntBASIC2.06□□□□□ -2.08
LSM3P62310 RNU6-1027P-201ENST00000383998 107 ntBASIC2.06□□□□□ -2.08
LSM3P62310 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
LSM3P62310 RPS3AP26-201ENST00000398259 784 ntBASIC2.06□□□□□ -2.08
LSM3P62310 RNU4-78P-201ENST00000410940 126 ntBASIC2.06□□□□□ -2.08
LSM3P62310 COTL1P1-201ENST00000422309 375 ntBASIC2.06□□□□□ -2.08
LSM3P62310 AL158156.1-201ENST00000422509 473 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms