Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU6-678P-201ENST00000516832 109 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 AL133457.1-201ENST00000564251 987 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC107954.1-201ENST00000565906 727 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC090616.5-202ENST00000582111 297 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 DUXAP11-201ENST00000603858 526 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 IGHV3-29-201ENST00000604817 344 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC006133.1-201ENST00000617106 264 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC009318.4-201ENST00000620496 486 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC018816.2-201ENST00000621460 353 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC091931.1-201ENST00000623488 728 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC4P56524 AC092192.1-201ENST00000633154 1018 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 RPS4XP5-202ENST00000449995 1334 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 AC021755.1-201ENST00000559747 1447 ntBASIC4.11□□□□□ -1.75
HDAC4P56524 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC4P56524 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC4P56524 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HDAC4P56524 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
HDAC4P56524 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.1□□□□□ -1.75
HDAC4P56524 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HDAC4P56524 Y_RNA.18-201ENST00000362461 102 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 SNORA62.3-201ENST00000365110 153 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 Y_RNA.493-201ENST00000384422 102 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HDAC4P56524 AL121972.1-201ENST00000402023 252 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.1□□□□□ -1.75
HDAC4P56524 AL035410.1-201ENST00000427409 427 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AL117339.2-201ENST00000430475 180 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.1□□□□□ -1.75
HDAC4P56524 AF228730.2-201ENST00000438784 848 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.1□□□□□ -1.75
HDAC4P56524 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.1□□□□□ -1.75
HDAC4P56524 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC4P56524 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.1□□□□□ -1.75
HDAC4P56524 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC4P56524 EEF1E1P1-201ENST00000446998 430 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 MTCO3P16-201ENST00000454456 754 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 ARPC3P2-201ENST00000457786 533 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC097493.1-201ENST00000463958 372 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 RPS4XP15-201ENST00000489210 795 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC108941.1-201ENST00000502853 530 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.1□□□□□ -1.75
HDAC4P56524 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HDAC4P56524 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC4P56524 AC239860.2-201ENST00000525886 270 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.1□□□□□ -1.75
HDAC4P56524 HSPE1P3-201ENST00000559254 309 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 MIR3186-201ENST00000577404 85 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC053481.3-201ENST00000577881 843 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.1□□□□□ -1.75
HDAC4P56524 AC006130.2-201ENST00000586202 326 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AP001981.2-201ENST00000603241 418 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AL596327.1-201ENST00000603629 213 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC135507.1-201ENST00000607214 561 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC4P56524 AC092628.2-201ENST00000622492 339 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 GDI2P1-201ENST00000429312 1336 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
HDAC4P56524 DDX43P2-201ENST00000604753 1354 ntBASIC4.1□□□□□ -1.75
HDAC4P56524 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.1□□□□□ -1.75
HDAC4P56524 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HDAC4P56524 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC4P56524 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDAC4P56524 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDAC4P56524 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDAC4P56524 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.09□□□□□ -1.75
HDAC4P56524 MIR670-201ENST00000390142 98 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 HMGB1P17-201ENST00000403495 628 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.09□□□□□ -1.75
HDAC4P56524 NPM1P11-201ENST00000417106 855 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 SEPT2P1-201ENST00000419651 180 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 OFD1P18Y-201ENST00000420889 959 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 AL049610.1-201ENST00000423374 372 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.09□□□□□ -1.75
HDAC4P56524 AC096638.2-201ENST00000434965 711 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 RPL23AP74-201ENST00000437246 471 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 THAP5P1-201ENST00000439089 262 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 KATNBL1P3-201ENST00000443475 909 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 RANP8-201ENST00000444720 713 ntBASIC4.09□□□□□ -1.75
HDAC4P56524 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms