Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPS20P2-201ENST00000402520 389 ntBASIC3.83□□□□□ -1.8
CDH12P55289 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH12P55289 RPS3AP3-201ENST00000411933 242 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH12P55289 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
CDH12P55289 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH12P55289 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH12P55289 C8orf59P1-201ENST00000429930 303 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 HMGB1P15-201ENST00000453854 435 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RPL23AP24-201ENST00000458203 385 ntBASIC3.83□□□□□ -1.8
CDH12P55289 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 ACTR3P3-201ENST00000480448 893 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 AC023424.2-201ENST00000493479 777 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RPL31P61-201ENST00000496160 376 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AC112204.1-201ENST00000502591 103 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH12P55289 NDUFB4P2-201ENST00000509515 391 ntBASIC3.83□□□□□ -1.8
CDH12P55289 TXNP6-201ENST00000510190 310 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH12P55289 RNA5SP49-201ENST00000516450 115 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RNA5SP519-201ENST00000516480 119 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AP003122.4-201ENST00000530980 758 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH12P55289 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH12P55289 AP001094.1-201ENST00000579805 193 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH12P55289 ELOCP28-201ENST00000590044 317 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
CDH12P55289 AL009028.1-201ENST00000604895 802 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH12P55289 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH12P55289 AP005264.7-201ENST00000625003 745 ntBASIC3.83□□□□□ -1.8
CDH12P55289 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH12P55289 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.83□□□□□ -1.8
CDH12P55289 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CDH12P55289 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH12P55289 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CDH12P55289 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDH12P55289 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CDH12P55289 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH12P55289 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH12P55289 ZNF734P-201ENST00000419494 1534 ntBASIC3.82□□□□□ -1.8
CDH12P55289 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH12P55289 AL161781.1-201ENST00000354277 403 ntBASIC3.82□□□□□ -1.8
CDH12P55289 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.82□□□□□ -1.8
CDH12P55289 RNVU1-3-201ENST00000364313 161 ntBASIC3.82□□□□□ -1.8
CDH12P55289 MIR192-201ENST00000384915 110 ntBASIC3.82□□□□□ -1.8
CDH12P55289 SNORD115.1-201ENST00000391109 76 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AL603766.1-201ENST00000407763 664 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH12P55289 RPS29P17-201ENST00000430795 166 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC087650.1-201ENST00000431445 468 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC011742.1-201ENST00000431448 434 ntBASIC3.82□□□□□ -1.8
CDH12P55289 SKP1P1-201ENST00000438081 489 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 DNAJC19P4-201ENST00000440115 345 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH12P55289 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 snoU109.1-201ENST00000459339 135 ntBASIC3.82□□□□□ -1.8
CDH12P55289 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH12P55289 AC093267.1-201ENST00000489176 961 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC069499.1-201ENST00000489433 509 ntBASIC3.82□□□□□ -1.8
CDH12P55289 RPL35P6-201ENST00000490024 372 ntBASIC3.82□□□□□ -1.8
CDH12P55289 RN7SL691P-201ENST00000494487 301 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC107401.1-201ENST00000503426 685 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH12P55289 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH12P55289 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH12P55289 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH12P55289 AC090578.1-201ENST00000604955 591 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC019193.2-201ENST00000610012 634 ntBASIC3.82□□□□□ -1.8
CDH12P55289 FAM27D1-201ENST00000612308 341 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC091834.1-201ENST00000614543 472 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC026368.1-201ENST00000614934 690 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AP001506.1-201ENST00000615444 211 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC108479.2-201ENST00000617314 601 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AL596245.1-201ENST00000618994 362 ntBASIC3.82□□□□□ -1.8
CDH12P55289 MIR6730-201ENST00000622213 67 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH12P55289 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
CDH12P55289 MIR6715B-201ENST00000637172 77 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC068137.3-201ENST00000639191 341 ntBASIC3.82□□□□□ -1.8
CDH12P55289 AC073869.6-201ENST00000640656 341 ntBASIC3.82□□□□□ -1.8
CDH12P55289 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH12P55289 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH12P55289 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH12P55289 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms