Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC231657.1-201ENST00000624313 397 ntBASIC3.64□□□□□ -1.83
PDX1P52945 CYP3A51P-201ENST00000633513 256 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC119674.1-207ENST00000641355 633 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDX1P52945 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDX1P52945 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PDX1P52945 AC073346.2-201ENST00000624724 2058 ntBASIC3.63□□□□□ -1.83
PDX1P52945 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PDX1P52945 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
PDX1P52945 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.63□□□□□ -1.83
PDX1P52945 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.63□□□□□ -1.83
PDX1P52945 MTCYBP24-201ENST00000420387 1106 ntBASIC3.63□□□□□ -1.83
PDX1P52945 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AL117351.1-201ENST00000438864 766 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AL445567.1-201ENST00000439121 144 ntBASIC3.63□□□□□ -1.83
PDX1P52945 OR6K5P-201ENST00000447050 945 ntBASIC3.63□□□□□ -1.83
PDX1P52945 PTGES3P3-201ENST00000511479 482 ntBASIC3.63□□□□□ -1.83
PDX1P52945 MTCYBP43-201ENST00000513621 740 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.63□□□□□ -1.83
PDX1P52945 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.63□□□□□ -1.83
PDX1P52945 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AC087373.1-201ENST00000524920 491 ntBASIC3.63□□□□□ -1.83
PDX1P52945 OR7K1P-201ENST00000546439 926 ntBASIC3.63□□□□□ -1.83
PDX1P52945 CENPUP2-201ENST00000555897 1186 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.63□□□□□ -1.83
PDX1P52945 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.63□□□□□ -1.83
PDX1P52945 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.63□□□□□ -1.83
PDX1P52945 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AC115621.1-201ENST00000604653 858 ntBASIC3.63□□□□□ -1.83
PDX1P52945 HMGB1P50-201ENST00000605814 607 ntBASIC3.63□□□□□ -1.83
PDX1P52945 AC024560.3-201ENST00000608482 349 ntBASIC3.63□□□□□ -1.83
PDX1P52945 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PDX1P52945 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
PDX1P52945 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PDX1P52945 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 AL079343.1-201ENST00000572358 1771 ntBASIC3.63□□□□□ -1.83
PDX1P52945 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDX1P52945 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PDX1P52945 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDX1P52945 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.62□□□□□ -1.83
PDX1P52945 RNU6-433P-201ENST00000363216 104 ntBASIC3.62□□□□□ -1.83
PDX1P52945 RNU6-777P-201ENST00000364265 104 ntBASIC3.62□□□□□ -1.83
PDX1P52945 RNU6-343P-201ENST00000364709 104 ntBASIC3.62□□□□□ -1.83
PDX1P52945 RNU6-356P-201ENST00000384140 107 ntBASIC3.62□□□□□ -1.83
PDX1P52945 RNY3P9-201ENST00000384727 106 ntBASIC3.62□□□□□ -1.83
PDX1P52945 U3.29-201ENST00000391296 212 ntBASIC3.62□□□□□ -1.83
PDX1P52945 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 HMGB1P17-201ENST00000403495 628 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AL355379.1-201ENST00000405542 640 ntBASIC3.62□□□□□ -1.83
PDX1P52945 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDX1P52945 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDX1P52945 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 RPL7P30-201ENST00000420888 709 ntBASIC3.62□□□□□ -1.83
PDX1P52945 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.62□□□□□ -1.83
PDX1P52945 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 ATP5HP2-201ENST00000433885 485 ntBASIC3.62□□□□□ -1.83
PDX1P52945 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 RPS3AP46-201ENST00000448352 682 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC005297.2-201ENST00000450430 606 ntBASIC3.62□□□□□ -1.83
PDX1P52945 RPL23AP35-201ENST00000451906 501 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.62□□□□□ -1.83
PDX1P52945 USP9YP10-201ENST00000454868 628 ntBASIC3.62□□□□□ -1.83
PDX1P52945 ARPC3P2-201ENST00000457786 533 ntBASIC3.62□□□□□ -1.83
PDX1P52945 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 AC114981.1-201ENST00000503897 678 ntBASIC3.62□□□□□ -1.83
PDX1P52945 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
PDX1P52945 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 USP9YP5-201ENST00000511770 630 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC010342.1-201ENST00000514047 877 ntBASIC3.62□□□□□ -1.83
PDX1P52945 SNORA70.24-201ENST00000517233 118 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.62□□□□□ -1.83
PDX1P52945 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 OR5B10P-201ENST00000532869 642 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.62□□□□□ -1.83
PDX1P52945 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.62□□□□□ -1.83
PDX1P52945 AC135628.1-201ENST00000568867 534 ntBASIC3.62□□□□□ -1.83
PDX1P52945 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 AP000811.1-201ENST00000603803 651 ntBASIC3.62□□□□□ -1.83
PDX1P52945 HMGN2P28-201ENST00000606102 262 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC004223.4-201ENST00000612426 332 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC079684.1-201ENST00000621405 437 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC079248.2-201ENST00000623779 326 ntBASIC3.62□□□□□ -1.83
PDX1P52945 AC079228.1-201ENST00000624774 1049 ntBASIC3.62□□□□□ -1.83
PDX1P52945 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.62□□□□□ -1.83
PDX1P52945 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.62□□□□□ -1.83
PDX1P52945 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PDX1P52945 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDX1P52945 MTCO1P24-201ENST00000515438 1558 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms