Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU6-685P-201ENST00000517088 95 ntBASIC7.23□□□□□ -1.25
PRIM1P49642 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.23□□□□□ -1.25
PRIM1P49642 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC7.23□□□□□ -1.25
PRIM1P49642 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PRIM1P49642 MIR4311-201ENST00000580794 100 ntBASIC7.23□□□□□ -1.25
PRIM1P49642 AC009570.1-201ENST00000609599 745 ntBASIC7.23□□□□□ -1.25
PRIM1P49642 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.23□□□□□ -1.25
PRIM1P49642 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.23□□□□□ -1.25
PRIM1P49642 AC109583.2-201ENST00000617367 129 ntBASIC7.23□□□□□ -1.25
PRIM1P49642 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.23□□□□□ -1.25
PRIM1P49642 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PRIM1P49642 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.23□□□□□ -1.25
PRIM1P49642 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PRIM1P49642 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PRIM1P49642 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC7.23□□□□□ -1.25
PRIM1P49642 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PRIM1P49642 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
PRIM1P49642 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
PRIM1P49642 ZNF734P-201ENST00000419494 1534 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 GABPAP-201ENST00000419271 1356 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
PRIM1P49642 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.22□□□□□ -1.25
PRIM1P49642 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.22□□□□□ -1.25
PRIM1P49642 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 RNU6-746P-201ENST00000384112 109 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 Y_RNA.518-201ENST00000384552 113 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 DBIP1-201ENST00000401435 260 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 MIR548I2-201ENST00000408348 149 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 RNU2-36P-201ENST00000410361 191 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 FAR2P4-202ENST00000425399 584 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AL590399.2-201ENST00000427536 309 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC7.22□□□□□ -1.25
PRIM1P49642 RPS27AP1-201ENST00000475545 471 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 AC007686.1-201ENST00000488511 463 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC108078.2-201ENST00000510750 236 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.22□□□□□ -1.25
PRIM1P49642 IGKV1OR2-1-201ENST00000514060 354 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 IL7-206ENST00000520269 456 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 CYCSP27-201ENST00000527643 293 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC091516.1-201ENST00000549191 703 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC026371.1-201ENST00000551867 419 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC7.22□□□□□ -1.25
PRIM1P49642 AL133153.1-201ENST00000557756 303 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.22□□□□□ -1.25
PRIM1P49642 AC011494.1-201ENST00000596454 237 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 MTND4LP5-201ENST00000605152 292 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 FAM25E-202ENST00000608562 189 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 AC091953.3-201ENST00000623220 236 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.22□□□□□ -1.25
PRIM1P49642 CDC27P2-201ENST00000425026 1922 ntBASIC7.22□□□□□ -1.25
PRIM1P49642 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRIM1P49642 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PRIM1P49642 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.22□□□□□ -1.25
PRIM1P49642 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
PRIM1P49642 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRIM1P49642 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PRIM1P49642 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
PRIM1P49642 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PRIM1P49642 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.21□□□□□ -1.26
PRIM1P49642 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.26
PRIM1P49642 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.21□□□□□ -1.26
PRIM1P49642 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
PRIM1P49642 RNU6-214P-201ENST00000384130 107 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 RNU6-434P-201ENST00000384376 107 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
PRIM1P49642 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC011816.1-201ENST00000441346 546 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC104073.1-201ENST00000451988 151 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC096745.1-201ENST00000509945 370 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC7.21□□□□□ -1.26
PRIM1P49642 GSTP1P1-201ENST00000548078 319 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC127381.1-201ENST00000555979 939 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 AC005341.1-201ENST00000571086 708 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.21□□□□□ -1.26
PRIM1P49642 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PRIM1P49642 AC069307.1-201ENST00000602820 447 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 AL049794.2-201ENST00000616301 365 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 AC091903.1-201ENST00000624322 454 ntBASIC7.21□□□□□ -1.26
PRIM1P49642 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRIM1P49642 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PRIM1P49642 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms