Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNCAP37840 MIR21-201ENST00000362134 72 ntBASIC1.98□□□□□ -2.09
SNCAP37840 RNA5SP456-201ENST00000364002 114 ntBASIC1.98□□□□□ -2.09
SNCAP37840 RNU6-301P-201ENST00000384277 107 ntBASIC1.98□□□□□ -2.09
SNCAP37840 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SNCAP37840 RNU4-65P-201ENST00000410473 140 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AL513477.1-202ENST00000417061 214 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.98□□□□□ -2.09
SNCAP37840 Z82209.1-201ENST00000422141 2135 ntBASIC1.98□□□□□ -2.09
SNCAP37840 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SNCAP37840 ELOCP11-201ENST00000436690 332 ntBASIC1.98□□□□□ -2.09
SNCAP37840 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.98□□□□□ -2.09
SNCAP37840 RPS26P56-201ENST00000444468 240 ntBASIC1.98□□□□□ -2.09
SNCAP37840 ELOCP16-201ENST00000444494 332 ntBASIC1.98□□□□□ -2.09
SNCAP37840 DPPA3P1-201ENST00000448050 469 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 RPL23AP45-201ENST00000476406 468 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AC011825.1-201ENST00000484967 388 ntBASIC1.98□□□□□ -2.09
SNCAP37840 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.98□□□□□ -2.09
SNCAP37840 AC006445.2-201ENST00000510061 472 ntBASIC1.98□□□□□ -2.09
SNCAP37840 RNA5SP468-201ENST00000516782 93 ntBASIC1.98□□□□□ -2.09
SNCAP37840 CIR1P1-201ENST00000524055 1133 ntBASIC1.98□□□□□ -2.09
SNCAP37840 SUB1P1-201ENST00000524415 382 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.98□□□□□ -2.09
SNCAP37840 OR4R2P-201ENST00000530815 597 ntBASIC1.98□□□□□ -2.09
SNCAP37840 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.98□□□□□ -2.09
SNCAP37840 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 AC079600.2-201ENST00000550076 130 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 RPL23AP84-201ENST00000571193 464 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AC022884.3-201ENST00000579571 248 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AC034102.8-201ENST00000615146 484 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AC007275.1-201ENST00000621243 671 ntBASIC1.98□□□□□ -2.09
SNCAP37840 AC103798.2-201ENST00000624292 632 ntBASIC1.98□□□□□ -2.09
SNCAP37840 CR392039.4-201ENST00000624968 501 ntBASIC1.98□□□□□ -2.09
SNCAP37840 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SNCAP37840 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.98□□□□□ -2.09
SNCAP37840 CKAP2P1-201ENST00000555477 2049 ntBASIC1.98□□□□□ -2.09
SNCAP37840 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SNCAP37840 AC026241.1-201ENST00000517873 2142 ntBASIC1.97□□□□□ -2.09
SNCAP37840 ZNF734P-201ENST00000419494 1534 ntBASIC1.97□□□□□ -2.09
SNCAP37840 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SNCAP37840 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SNCAP37840 GNG5P1-201ENST00000255500 204 ntBASIC1.97□□□□□ -2.09
SNCAP37840 RNU6-7-201ENST00000364784 107 ntBASIC1.97□□□□□ -2.09
SNCAP37840 RNU6-8-201ENST00000365467 107 ntBASIC1.97□□□□□ -2.09
SNCAP37840 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.97□□□□□ -2.09
SNCAP37840 FAT1P1-201ENST00000406588 507 ntBASIC1.97□□□□□ -2.09
SNCAP37840 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNCAP37840 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.97□□□□□ -2.09
SNCAP37840 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.97□□□□□ -2.09
SNCAP37840 AL513343.1-201ENST00000451818 792 ntBASIC1.97□□□□□ -2.09
SNCAP37840 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.97□□□□□ -2.09
SNCAP37840 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.97□□□□□ -2.09
SNCAP37840 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.97□□□□□ -2.09
SNCAP37840 AC093663.2-201ENST00000484625 313 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.97□□□□□ -2.09
SNCAP37840 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.97□□□□□ -2.09
SNCAP37840 HMGB1P22-201ENST00000505315 124 ntBASIC1.97□□□□□ -2.09
SNCAP37840 TTC39CP1-201ENST00000512513 755 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC108043.1-201ENST00000512696 574 ntBASIC1.97□□□□□ -2.09
SNCAP37840 SETP12-201ENST00000514068 805 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.97□□□□□ -2.09
SNCAP37840 RN7SKP40-201ENST00000517211 242 ntBASIC1.97□□□□□ -2.09
SNCAP37840 SNORA70.24-201ENST00000517233 118 ntBASIC1.97□□□□□ -2.09
SNCAP37840 OSBPL9P3-201ENST00000534523 595 ntBASIC1.97□□□□□ -2.09
SNCAP37840 GTF2IP8-201ENST00000560687 584 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC084373.1-201ENST00000603311 235 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AL161756.2-201ENST00000604597 246 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC012468.1-201ENST00000604888 430 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC015849.6-201ENST00000605454 474 ntBASIC1.97□□□□□ -2.09
SNCAP37840 VIS1.1-201ENST00000610517 203 ntBASIC1.97□□□□□ -2.09
SNCAP37840 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNCAP37840 AL049780.3-201ENST00000624612 1583 ntBASIC1.97□□□□□ -2.09
SNCAP37840 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SNCAP37840 AC244517.1-201ENST00000606030 2086 ntBASIC1.97□□□□□ -2.09
SNCAP37840 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.97□□□□□ -2.09
SNCAP37840 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNCAP37840 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNCAP37840 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNCAP37840 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SNCAP37840 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SNCAP37840 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SNCAP37840 SNORA51.11-201ENST00000384442 131 ntBASIC1.96□□□□□ -2.1
SNCAP37840 MIR27B-201ENST00000385129 97 ntBASIC1.96□□□□□ -2.1
SNCAP37840 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNCAP37840 AL139039.1-201ENST00000401900 692 ntBASIC1.96□□□□□ -2.1
SNCAP37840 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.96□□□□□ -2.1
SNCAP37840 ARL5AP4-201ENST00000430731 512 ntBASIC1.96□□□□□ -2.1
SNCAP37840 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
SNCAP37840 SNORD109B-201ENST00000458961 67 ntBASIC1.96□□□□□ -2.1
SNCAP37840 SNORD109A-201ENST00000459128 67 ntBASIC1.96□□□□□ -2.1
SNCAP37840 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.96□□□□□ -2.1
SNCAP37840 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
SNCAP37840 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNCAP37840 GTF2IP9-201ENST00000502460 301 ntBASIC1.96□□□□□ -2.1
SNCAP37840 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms