Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR1244-4-202ENST00000636813 85 ntBASIC5.7□□□□□ -1.5
GPC1P35052 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GPC1P35052 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC1P35052 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GPC1P35052 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC1P35052 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 BCORP1-203ENST00000513194 5093 ntBASIC5.7□□□□□ -1.5
GPC1P35052 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 AC025470.1-201ENST00000510053 2032 ntBASIC5.69□□□□□ -1.5
GPC1P35052 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GPC1P35052 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 RNU6-545P-201ENST00000362681 104 ntBASIC5.69□□□□□ -1.5
GPC1P35052 RNA5SP240-201ENST00000365355 128 ntBASIC5.69□□□□□ -1.5
GPC1P35052 RN7SKP292-201ENST00000365522 317 ntBASIC5.69□□□□□ -1.5
GPC1P35052 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 RNU6-48P-201ENST00000384161 107 ntBASIC5.69□□□□□ -1.5
GPC1P35052 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GPC1P35052 RNU2-33P-201ENST00000410344 192 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.69□□□□□ -1.5
GPC1P35052 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.69□□□□□ -1.5
GPC1P35052 UBE2D3P2-201ENST00000424409 445 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.69□□□□□ -1.5
GPC1P35052 AC016027.4-201ENST00000450866 277 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC002553.3-201ENST00000453002 341 ntBASIC5.69□□□□□ -1.5
GPC1P35052 RNU7-138P-201ENST00000459479 64 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC091180.1-201ENST00000462104 372 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC008481.1-201ENST00000463278 396 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC098869.1-201ENST00000481627 292 ntBASIC5.69□□□□□ -1.5
GPC1P35052 RNU6-255P-201ENST00000516957 105 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC144568.1-201ENST00000520139 137 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC116917.1-201ENST00000520558 305 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC100870.1-201ENST00000522035 505 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC036111.2-201ENST00000533247 901 ntBASIC5.69□□□□□ -1.5
GPC1P35052 MRPS21P8-201ENST00000569196 235 ntBASIC5.69□□□□□ -1.5
GPC1P35052 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 AL355877.2-201ENST00000603670 358 ntBASIC5.69□□□□□ -1.5
GPC1P35052 uc_338.26-201ENST00000612659 160 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC074140.1-201ENST00000621617 208 ntBASIC5.69□□□□□ -1.5
GPC1P35052 AC110801.1-201ENST00000623590 212 ntBASIC5.69□□□□□ -1.5
GPC1P35052 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC1P35052 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.69□□□□□ -1.5
GPC1P35052 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
GPC1P35052 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
GPC1P35052 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
GPC1P35052 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC1P35052 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC1P35052 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC1P35052 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC1P35052 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC1P35052 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC1P35052 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC1P35052 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GPC1P35052 RNU1-134P-201ENST00000362935 165 ntBASIC5.68□□□□□ -1.5
GPC1P35052 RNU6-1303P-201ENST00000364841 107 ntBASIC5.68□□□□□ -1.5
GPC1P35052 RNU6-1329P-201ENST00000365664 107 ntBASIC5.68□□□□□ -1.5
GPC1P35052 RNU6-754P-201ENST00000391166 107 ntBASIC5.68□□□□□ -1.5
GPC1P35052 U3.29-201ENST00000391296 212 ntBASIC5.68□□□□□ -1.5
GPC1P35052 SNORA77.2-201ENST00000408571 112 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AC092809.3-201ENST00000415453 231 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC1P35052 AC130360.1-201ENST00000425489 1117 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AC099782.1-201ENST00000425889 474 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 AC022431.1-201ENST00000450941 438 ntBASIC5.68□□□□□ -1.5
GPC1P35052 RN7SKP288-201ENST00000516227 268 ntBASIC5.68□□□□□ -1.5
GPC1P35052 Y_RNA.687-201ENST00000516558 91 ntBASIC5.68□□□□□ -1.5
GPC1P35052 RN7SKP70-201ENST00000516655 271 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 AC130365.2-201ENST00000525882 1201 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.68□□□□□ -1.5
GPC1P35052 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.68□□□□□ -1.5
GPC1P35052 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.68□□□□□ -1.5
GPC1P35052 MIR6780B-201ENST00000610307 79 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AP001282.2-201ENST00000616149 309 ntBASIC5.68□□□□□ -1.5
GPC1P35052 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.68□□□□□ -1.5
GPC1P35052 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.68□□□□□ -1.5
GPC1P35052 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GPC1P35052 THAP12P9-201ENST00000503971 2360 ntBASIC5.68□□□□□ -1.5
GPC1P35052 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms