Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 U2.2-201ENST00000616535 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.3-201ENST00000617785 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.19-201ENST00000618602 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 RNU2-1-201ENST00000618664 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.6-201ENST00000619225 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.5-201ENST00000619465 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 U2.10-201ENST00000620268 191 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 MIR219B-201ENST00000637023 88 ntBASIC3.43□□□□□ -1.86
CLIP1P30622 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP1P30622 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP1P30622 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP1P30622 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP1P30622 SNORA11.4-201ENST00000408823 129 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP1P30622 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP1P30622 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP1P30622 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 ATP5F1P5-201ENST00000526403 760 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.42□□□□□ -1.86
CLIP1P30622 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.42□□□□□ -1.86
CLIP1P30622 MTCYBP28-201ENST00000566728 1132 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 AP000787.2-201ENST00000604432 568 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 AC103710.1-201ENST00000610003 901 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP1P30622 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP1P30622 C2orf27A-204ENST00000623058 969 ntBASIC3.42□□□□□ -1.86
CLIP1P30622 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP1P30622 SNORA48.3-201ENST00000391081 134 ntBASIC3.41□□□□□ -1.86
CLIP1P30622 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP1P30622 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP1P30622 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP1P30622 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
CLIP1P30622 ATG10-AS1-201ENST00000504846 648 ntBASIC3.41□□□□□ -1.86
CLIP1P30622 AP000889.2-201ENST00000532684 490 ntBASIC3.41□□□□□ -1.86
CLIP1P30622 ABI1P1-201ENST00000603375 1120 ntBASIC3.41□□□□□ -1.86
CLIP1P30622 AL356266.1-201ENST00000623311 483 ntBASIC3.41□□□□□ -1.86
CLIP1P30622 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP1P30622 AC006378.2-201ENST00000623178 2476 ntBASIC3.41□□□□□ -1.86
CLIP1P30622 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CLIP1P30622 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.86
CLIP1P30622 AC022336.2-201ENST00000568966 2538 ntBASIC3.4□□□□□ -1.86
CLIP1P30622 HMGN2P23-201ENST00000456759 269 ntBASIC3.4□□□□□ -1.87
CLIP1P30622 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.4□□□□□ -1.87
CLIP1P30622 AC087241.2-201ENST00000535801 324 ntBASIC3.4□□□□□ -1.87
CLIP1P30622 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP1P30622 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP1P30622 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
CLIP1P30622 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP1P30622 CU459211.1-201ENST00000635667 749 ntBASIC3.4□□□□□ -1.87
CLIP1P30622 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP1P30622 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLIP1P30622 U8.9-201ENST00000365667 134 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP1P30622 SNORA67.3-201ENST00000384366 140 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 BTBD10P2-201ENST00000404779 676 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP1P30622 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP1P30622 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.39□□□□□ -1.87
CLIP1P30622 MIR5002-201ENST00000584713 97 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP1P30622 AC103710.2-201ENST00000609912 942 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 AC012531.5-201ENST00000611375 151 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 AL359198.2-201ENST00000611836 194 ntBASIC3.39□□□□□ -1.87
CLIP1P30622 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP1P30622 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP1P30622 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP1P30622 RNA5SP181-201ENST00000410246 98 ntBASIC3.38□□□□□ -1.87
CLIP1P30622 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.38□□□□□ -1.87
CLIP1P30622 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.38□□□□□ -1.87
CLIP1P30622 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP1P30622 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP1P30622 IFNWP4-201ENST00000453148 294 ntBASIC3.38□□□□□ -1.87
CLIP1P30622 RPL23AP42-201ENST00000471152 471 ntBASIC3.38□□□□□ -1.87
CLIP1P30622 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP1P30622 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.38□□□□□ -1.87
CLIP1P30622 MTND5P29-201ENST00000458676 1807 ntBASIC3.38□□□□□ -1.87
CLIP1P30622 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP1P30622 RNA5SP99-201ENST00000364020 114 ntBASIC3.37□□□□□ -1.87
CLIP1P30622 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.37□□□□□ -1.87
CLIP1P30622 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP1P30622 IGHV3-76-201ENST00000522465 295 ntBASIC3.37□□□□□ -1.87
CLIP1P30622 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP1P30622 LRRC37A5P-203ENST00000580181 585 ntBASIC3.37□□□□□ -1.87
CLIP1P30622 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP1P30622 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CLIP1P30622 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP1P30622 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP1P30622 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP1P30622 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP1P30622 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.36□□□□□ -1.87
CLIP1P30622 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.36□□□□□ -1.87
CLIP1P30622 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.36□□□□□ -1.87
CLIP1P30622 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CLIP1P30622 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP1P30622 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP1P30622 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CLIP1P30622 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
CLIP1P30622 U8.13-201ENST00000390842 128 ntBASIC3.36□□□□□ -1.87
CLIP1P30622 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.36□□□□□ -1.87
CLIP1P30622 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms