Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 U2.11-201ENST00000616345 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 U2.2-201ENST00000616535 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 U2.3-201ENST00000617785 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 U2.19-201ENST00000618602 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 RNU2-1-201ENST00000618664 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 U2.6-201ENST00000619225 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 U2.5-201ENST00000619465 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 U2.10-201ENST00000620268 191 ntBASIC3.35□□□□□ -1.87
PTPRMP28827 AC090229.1-201ENST00000590983 1609 ntBASIC3.34□□□□□ -1.87
PTPRMP28827 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.34□□□□□ -1.87
PTPRMP28827 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTPRMP28827 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
PTPRMP28827 AL158825.1-201ENST00000414735 521 ntBASIC3.34□□□□□ -1.88
PTPRMP28827 AC073136.2-201ENST00000417282 849 ntBASIC3.34□□□□□ -1.88
PTPRMP28827 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.34□□□□□ -1.88
PTPRMP28827 AL513175.2-201ENST00000422071 443 ntBASIC3.34□□□□□ -1.88
PTPRMP28827 AL591719.1-201ENST00000444669 744 ntBASIC3.34□□□□□ -1.88
PTPRMP28827 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.34□□□□□ -1.88
PTPRMP28827 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.34□□□□□ -1.88
PTPRMP28827 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.34□□□□□ -1.88
PTPRMP28827 AGGF1P8-201ENST00000562979 1000 ntBASIC3.34□□□□□ -1.88
PTPRMP28827 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.34□□□□□ -1.88
PTPRMP28827 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRMP28827 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPRMP28827 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.33□□□□□ -1.88
PTPRMP28827 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPRMP28827 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PTPRMP28827 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRMP28827 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPRMP28827 MOB1AP2-201ENST00000446060 614 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 RPL21P18-201ENST00000469899 480 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 RPL9P33-201ENST00000484311 566 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 LINC00888-204ENST00000487386 421 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPRMP28827 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.33□□□□□ -1.88
PTPRMP28827 AC011611.5-201ENST00000552477 578 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 SNORA4-201ENST00000584302 138 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPRMP28827 AC103710.1-201ENST00000610003 901 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 AC004825.2-201ENST00000616634 455 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
PTPRMP28827 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPRMP28827 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
PTPRMP28827 Y_RNA.112-201ENST00000363250 102 ntBASIC3.32□□□□□ -1.88
PTPRMP28827 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTPRMP28827 RPS6P12-201ENST00000432491 726 ntBASIC3.32□□□□□ -1.88
PTPRMP28827 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PTPRMP28827 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPRMP28827 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPRMP28827 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPRMP28827 AC067747.1-201ENST00000608026 250 ntBASIC3.32□□□□□ -1.88
PTPRMP28827 CR589904.2-201ENST00000612533 440 ntBASIC3.32□□□□□ -1.88
PTPRMP28827 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTPRMP28827 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.32□□□□□ -1.88
PTPRMP28827 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRMP28827 AL591416.1-201ENST00000404015 867 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 AC092045.1-201ENST00000495716 1231 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 CCNHP1-201ENST00000513311 678 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 RPS27AP18-201ENST00000515536 459 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 AC107918.3-201ENST00000533272 382 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRMP28827 AC025281.1-201ENST00000567026 265 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPRMP28827 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.31□□□□□ -1.88
PTPRMP28827 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRMP28827 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTPRMP28827 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPRMP28827 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRMP28827 AC019155.1-201ENST00000382242 574 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 RNY1P14-201ENST00000384426 108 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 MIR221-201ENST00000385135 110 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 RPS15AP12-201ENST00000419498 388 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 MTCO2P17-201ENST00000424336 677 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPRMP28827 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPRMP28827 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPRMP28827 AC107015.1-201ENST00000466902 747 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 AL163540.1-201ENST00000485382 386 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 NAMPTP2-201ENST00000505629 1115 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 MTCYBP19-201ENST00000517463 1124 ntBASIC3.3□□□□□ -1.88
PTPRMP28827 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPRMP28827 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPRMP28827 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRMP28827 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRMP28827 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRMP28827 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPRMP28827 AL445437.1-201ENST00000623157 3087 ntBASIC3.29□□□□□ -1.88
PTPRMP28827 RNU6-661P-201ENST00000362409 107 ntBASIC3.29□□□□□ -1.88
PTPRMP28827 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTPRMP28827 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPRMP28827 PTP4A1P7-201ENST00000423476 514 ntBASIC3.29□□□□□ -1.88
PTPRMP28827 AC092427.1-202ENST00000430569 476 ntBASIC3.29□□□□□ -1.88
PTPRMP28827 RPL21P71-201ENST00000465598 459 ntBASIC3.29□□□□□ -1.88
PTPRMP28827 POU5F1P7-201ENST00000508759 541 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms