Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 MIR1284-201ENST00000408337 120 ntBASIC4.08□□□□□ -1.76
BDNFP23560 RNU6ATAC-201ENST00000408749 126 ntBASIC4.08□□□□□ -1.76
BDNFP23560 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BDNFP23560 RNA5SP38-201ENST00000410750 119 ntBASIC4.08□□□□□ -1.76
BDNFP23560 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.08□□□□□ -1.76
BDNFP23560 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.08□□□□□ -1.76
BDNFP23560 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.08□□□□□ -1.76
BDNFP23560 AL500522.2-201ENST00000448562 343 ntBASIC4.08□□□□□ -1.76
BDNFP23560 EXOSC3P1-201ENST00000448649 500 ntBASIC4.08□□□□□ -1.76
BDNFP23560 AC140076.1-201ENST00000449897 361 ntBASIC4.08□□□□□ -1.76
BDNFP23560 NANOGP10-201ENST00000453325 895 ntBASIC4.08□□□□□ -1.76
BDNFP23560 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 RPL7P24-201ENST00000493052 752 ntBASIC4.08□□□□□ -1.76
BDNFP23560 DEFB131D-201ENST00000526803 184 ntBASIC4.08□□□□□ -1.76
BDNFP23560 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BDNFP23560 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.08□□□□□ -1.76
BDNFP23560 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
BDNFP23560 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.08□□□□□ -1.76
BDNFP23560 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.08□□□□□ -1.76
BDNFP23560 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 AC105224.1-201ENST00000587055 421 ntBASIC4.08□□□□□ -1.76
BDNFP23560 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.08□□□□□ -1.76
BDNFP23560 DDX43P2-201ENST00000604753 1354 ntBASIC4.08□□□□□ -1.76
BDNFP23560 AC233263.6-201ENST00000631132 1963 ntBASIC4.08□□□□□ -1.76
BDNFP23560 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.08□□□□□ -1.76
BDNFP23560 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BDNFP23560 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
BDNFP23560 SDAD1P2-201ENST00000441308 2028 ntBASIC4.07□□□□□ -1.76
BDNFP23560 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BDNFP23560 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
BDNFP23560 AC087359.1-201ENST00000508335 1740 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AP004289.2-201ENST00000444413 1457 ntBASIC4.07□□□□□ -1.76
BDNFP23560 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BDNFP23560 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
BDNFP23560 RNU6-359P-201ENST00000365466 108 ntBASIC4.07□□□□□ -1.76
BDNFP23560 SNORA48.7-201ENST00000391302 135 ntBASIC4.07□□□□□ -1.76
BDNFP23560 SNORA57.3-201ENST00000411095 141 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
BDNFP23560 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BDNFP23560 AL356320.2-201ENST00000417263 507 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AL513175.2-201ENST00000422071 443 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AL139421.1-201ENST00000423010 169 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC234781.2-201ENST00000426370 994 ntBASIC4.07□□□□□ -1.76
BDNFP23560 HSFY7P-201ENST00000432672 318 ntBASIC4.07□□□□□ -1.76
BDNFP23560 KCTD9P3-201ENST00000434597 1169 ntBASIC4.07□□□□□ -1.76
BDNFP23560 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.07□□□□□ -1.76
BDNFP23560 NDUFB4P6-201ENST00000436819 366 ntBASIC4.07□□□□□ -1.76
BDNFP23560 HSFY8P-201ENST00000437934 318 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.07□□□□□ -1.76
BDNFP23560 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.07□□□□□ -1.76
BDNFP23560 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.07□□□□□ -1.76
BDNFP23560 RPS17P13-201ENST00000448974 407 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC010655.1-201ENST00000449336 292 ntBASIC4.07□□□□□ -1.76
BDNFP23560 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
BDNFP23560 HSFY5P-201ENST00000453726 309 ntBASIC4.07□□□□□ -1.76
BDNFP23560 UBDP1-202ENST00000457888 382 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC092798.1-201ENST00000458542 409 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC005410.1-202ENST00000460347 485 ntBASIC4.07□□□□□ -1.76
BDNFP23560 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.07□□□□□ -1.76
BDNFP23560 MTND4LP22-201ENST00000508209 276 ntBASIC4.07□□□□□ -1.76
BDNFP23560 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.07□□□□□ -1.76
BDNFP23560 AC010265.1-201ENST00000513509 211 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC093677.1-201ENST00000514414 678 ntBASIC4.07□□□□□ -1.76
BDNFP23560 OR6C7P-201ENST00000547875 934 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.07□□□□□ -1.76
BDNFP23560 AC090695.1-201ENST00000561269 1222 ntBASIC4.07□□□□□ -1.76
BDNFP23560 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.07□□□□□ -1.76
BDNFP23560 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.07□□□□□ -1.76
BDNFP23560 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.07□□□□□ -1.76
BDNFP23560 DUXAP3-201ENST00000603616 594 ntBASIC4.07□□□□□ -1.76
BDNFP23560 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC006270.3-201ENST00000605967 1036 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC128687.2-201ENST00000609657 566 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AP000254.1-201ENST00000609934 520 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC005344.1-201ENST00000613391 459 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AL121772.2-201ENST00000614331 297 ntBASIC4.07□□□□□ -1.76
BDNFP23560 AC039056.2-201ENST00000622261 511 ntBASIC4.07□□□□□ -1.76
BDNFP23560 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.07□□□□□ -1.76
BDNFP23560 SNORA50A-202ENST00000629536 136 ntBASIC4.07□□□□□ -1.76
BDNFP23560 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BDNFP23560 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.07□□□□□ -1.76
BDNFP23560 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.07□□□□□ -1.76
BDNFP23560 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.06□□□□□ -1.76
BDNFP23560 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BDNFP23560 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BDNFP23560 RNU5A-1-201ENST00000362698 116 ntBASIC4.06□□□□□ -1.76
BDNFP23560 RNA5SP124-201ENST00000362739 110 ntBASIC4.06□□□□□ -1.76
BDNFP23560 RNU4-92P-201ENST00000363783 136 ntBASIC4.06□□□□□ -1.76
BDNFP23560 SNORA62.3-201ENST00000365110 153 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AL359837.1-201ENST00000381357 287 ntBASIC4.06□□□□□ -1.76
BDNFP23560 U8.11-201ENST00000384699 133 ntBASIC4.06□□□□□ -1.76
BDNFP23560 U8.12-201ENST00000384701 133 ntBASIC4.06□□□□□ -1.76
BDNFP23560 MIR199A2-201ENST00000385289 110 ntBASIC4.06□□□□□ -1.76
BDNFP23560 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
BDNFP23560 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms