Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RFX1P22670 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RFX1P22670 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX1P22670 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.06□□□□□ -1.44
RFX1P22670 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.06□□□□□ -1.44
RFX1P22670 MAPK10-304ENST00000641341 3984 ntBASIC6.06□□□□□ -1.44
RFX1P22670 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 SNORA64.1-201ENST00000362600 132 ntBASIC6.06□□□□□ -1.44
RFX1P22670 Y_RNA.202-201ENST00000364083 110 ntBASIC6.06□□□□□ -1.44
RFX1P22670 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RFX1P22670 RNY4P36-201ENST00000391116 96 ntBASIC6.06□□□□□ -1.44
RFX1P22670 MIR548F5-201ENST00000408421 86 ntBASIC6.06□□□□□ -1.44
RFX1P22670 RN7SKP158-201ENST00000410453 326 ntBASIC6.06□□□□□ -1.44
RFX1P22670 RPL26P29-201ENST00000415623 438 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.06□□□□□ -1.44
RFX1P22670 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 MED28P3-201ENST00000444288 531 ntBASIC6.06□□□□□ -1.44
RFX1P22670 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 AC107399.1-201ENST00000451226 265 ntBASIC6.06□□□□□ -1.44
RFX1P22670 IFNWP4-201ENST00000453148 294 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AC116533.1-201ENST00000459748 321 ntBASIC6.06□□□□□ -1.44
RFX1P22670 RN7SL329P-201ENST00000467740 299 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AC100832.1-201ENST00000471945 383 ntBASIC6.06□□□□□ -1.44
RFX1P22670 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.06□□□□□ -1.44
RFX1P22670 RN7SL547P-201ENST00000490793 290 ntBASIC6.06□□□□□ -1.44
RFX1P22670 HMGB3P15-201ENST00000507326 574 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.06□□□□□ -1.44
RFX1P22670 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.06□□□□□ -1.44
RFX1P22670 IGLV3-24-201ENST00000517477 197 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.06□□□□□ -1.44
RFX1P22670 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.06□□□□□ -1.44
RFX1P22670 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.06□□□□□ -1.44
RFX1P22670 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.06□□□□□ -1.44
RFX1P22670 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.06□□□□□ -1.44
RFX1P22670 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 AC068446.3-201ENST00000555285 382 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.06□□□□□ -1.44
RFX1P22670 AC080078.3-201ENST00000605407 463 ntBASIC6.06□□□□□ -1.44
RFX1P22670 AC024940.4-201ENST00000605507 246 ntBASIC6.06□□□□□ -1.44
RFX1P22670 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 AL355802.3-201ENST00000607571 545 ntBASIC6.06□□□□□ -1.44
RFX1P22670 Mico1.1-201ENST00000611698 204 ntBASIC6.06□□□□□ -1.44
RFX1P22670 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 CU639417.4-201ENST00000623928 207 ntBASIC6.06□□□□□ -1.44
RFX1P22670 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RFX1P22670 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
RFX1P22670 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.06□□□□□ -1.44
RFX1P22670 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.06□□□□□ -1.44
RFX1P22670 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.05□□□□□ -1.44
RFX1P22670 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.05□□□□□ -1.44
RFX1P22670 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
RFX1P22670 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RFX1P22670 RNA5SP319-201ENST00000362768 119 ntBASIC6.05□□□□□ -1.44
RFX1P22670 RN7SKP44-201ENST00000363602 316 ntBASIC6.05□□□□□ -1.44
RFX1P22670 RNU6-263P-201ENST00000363811 107 ntBASIC6.05□□□□□ -1.44
RFX1P22670 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 MIR153-1-201ENST00000384914 90 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AL133270.1-201ENST00000402635 279 ntBASIC6.05□□□□□ -1.44
RFX1P22670 RPL21P67-201ENST00000402896 478 ntBASIC6.05□□□□□ -1.44
RFX1P22670 RPS23P10-201ENST00000416185 486 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AL354766.1-201ENST00000423396 542 ntBASIC6.05□□□□□ -1.44
RFX1P22670 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.05□□□□□ -1.44
RFX1P22670 Z82205.1-201ENST00000428456 297 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.05□□□□□ -1.44
RFX1P22670 RPL12P3-201ENST00000440080 396 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AL121871.1-201ENST00000443413 436 ntBASIC6.05□□□□□ -1.44
RFX1P22670 FGF7P3-201ENST00000454645 303 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 AC079168.1-201ENST00000458741 345 ntBASIC6.05□□□□□ -1.44
RFX1P22670 SCARNA18-201ENST00000459004 134 ntBASIC6.05□□□□□ -1.44
RFX1P22670 RN7SL51P-201ENST00000468230 285 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC090096.1-201ENST00000489168 390 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC010350.1-201ENST00000504908 231 ntBASIC6.05□□□□□ -1.44
RFX1P22670 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.05□□□□□ -1.44
RFX1P22670 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.05□□□□□ -1.44
RFX1P22670 RNU6-273P-201ENST00000516937 96 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC008694.2-201ENST00000517591 306 ntBASIC6.05□□□□□ -1.44
RFX1P22670 CDH12P4-201ENST00000517835 295 ntBASIC6.05□□□□□ -1.44
RFX1P22670 CDH12P3-201ENST00000517935 295 ntBASIC6.05□□□□□ -1.44
RFX1P22670 CDH12P1-201ENST00000518435 295 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms