Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNA5SP432-201ENST00000362480 116 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGA1P17096 RNU2-37P-201ENST00000410695 177 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 RAP1BP1-201ENST00000412709 553 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 HMGB1P11-201ENST00000413899 637 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGA1P17096 AC005517.2-201ENST00000424673 553 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGA1P17096 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGA1P17096 AC106872.3-201ENST00000495104 446 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGA1P17096 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGA1P17096 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGA1P17096 EEF1A1P37-201ENST00000522748 715 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HMGA1P17096 AP000867.2-201ENST00000532468 320 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HMGA1P17096 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGA1P17096 MIR4458-201ENST00000578872 75 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGA1P17096 AC016877.3-201ENST00000606778 504 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 AL356266.1-201ENST00000623311 483 ntBASIC2.24□□□□□ -2.05
HMGA1P17096 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGA1P17096 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGA1P17096 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGA1P17096 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGA1P17096 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.23□□□□□ -2.05
HMGA1P17096 AL355578.1-201ENST00000607405 1328 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGA1P17096 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGA1P17096 FAM35CP-201ENST00000554755 2470 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HMGA1P17096 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 RNU2-2P-201ENST00000410396 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGA1P17096 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGA1P17096 MTND4LP13-201ENST00000425022 298 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 TOMM20P4-201ENST00000427861 435 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 RAB9AP5-201ENST00000437794 597 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 RAB9AP2-201ENST00000443911 597 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGA1P17096 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGA1P17096 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGA1P17096 MTND4P2-201ENST00000507767 1203 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGA1P17096 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGA1P17096 AL627309.6-201ENST00000606857 840 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.15-201ENST00000611544 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 CR589904.2-201ENST00000612533 440 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.16-201ENST00000613119 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.12-201ENST00000613778 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.20-201ENST00000613956 192 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.9-201ENST00000615427 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.11-201ENST00000616345 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.2-201ENST00000616535 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.3-201ENST00000617785 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.19-201ENST00000618602 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 RNU2-1-201ENST00000618664 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.6-201ENST00000619225 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.5-201ENST00000619465 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 U2.10-201ENST00000620268 191 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
HMGA1P17096 AC110994.2-201ENST00000635481 492 ntBASIC2.23□□□□□ -2.05
HMGA1P17096 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGA1P17096 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGA1P17096 RNA5SP88-201ENST00000365560 109 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 GSTA9P-201ENST00000406231 611 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGA1P17096 AL445646.1-201ENST00000431784 216 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGA1P17096 HMGB3P10-201ENST00000434734 572 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGA1P17096 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC008481.1-201ENST00000463278 396 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC006483.1-201ENST00000487308 313 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 SNX5P1-201ENST00000505757 1041 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC008837.1-201ENST00000511513 412 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC104986.1-201ENST00000517978 436 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC087241.2-201ENST00000535801 324 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC034268.2-201ENST00000571784 482 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC078899.3-201ENST00000599065 212 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC011468.4-201ENST00000603942 409 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGA1P17096 AC103710.1-201ENST00000610003 901 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC245517.5-201ENST00000611529 162 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AL359198.2-201ENST00000611836 194 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC116447.1-201ENST00000613153 453 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 CU459211.1-201ENST00000635667 749 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 AC241585.2-209ENST00000638217 143 ntBASIC2.22□□□□□ -2.05
HMGA1P17096 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGA1P17096 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
HMGA1P17096 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGA1P17096 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms