Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 SNORA72.3-201ENST00000365074 132 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.72□□□□□ -1.81
PDGFRAP16234 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 Y_RNA.465-201ENST00000384293 102 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFRAP16234 RNU6-712P-201ENST00000410558 100 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 RNU2-15P-201ENST00000410692 191 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 MTCO3P12-201ENST00000416718 547 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 TIMM9P2-201ENST00000419324 266 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AL049610.1-201ENST00000423374 372 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 PSMA6P3-201ENST00000428242 164 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC084290.1-201ENST00000434995 374 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.72□□□□□ -1.81
PDGFRAP16234 SNORD105B-201ENST00000458770 79 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 U3.44-201ENST00000458938 192 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC010285.1-201ENST00000470580 392 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFRAP16234 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFRAP16234 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AC114981.1-201ENST00000503897 678 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.72□□□□□ -1.81
PDGFRAP16234 SNORA70.18-201ENST00000516696 98 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 MTND2P32-201ENST00000521584 1038 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AC053481.3-201ENST00000577881 843 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC022662.1-201ENST00000580252 331 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 MIR3922-201ENST00000585192 84 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.72□□□□□ -1.81
PDGFRAP16234 AC020914.6-201ENST00000594327 272 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 DUXAP3-201ENST00000603616 594 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC010738.1-201ENST00000604970 987 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC009974.1-201ENST00000608881 455 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AC027449.1-201ENST00000608890 407 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDGFRAP16234 AC068647.1-201ENST00000489539 2265 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PDGFRAP16234 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PDGFRAP16234 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.71□□□□□ -1.81
PDGFRAP16234 AC021755.1-201ENST00000559747 1447 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFRAP16234 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFRAP16234 Y_RNA.192-201ENST00000363977 102 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 RNU6-621P-201ENST00000364752 109 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFRAP16234 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PDGFRAP16234 RNU6-1242P-201ENST00000391052 103 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 Z98941.1-201ENST00000407764 100 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFRAP16234 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFRAP16234 DBIP2-201ENST00000419076 262 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 MTND2P9-201ENST00000422293 931 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC002075.2-201ENST00000425207 252 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.71□□□□□ -1.82
PDGFRAP16234 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 EZH2P1-201ENST00000431167 291 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 ATP5F1P1-201ENST00000433775 569 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
PDGFRAP16234 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PDGFRAP16234 MTND4P6-201ENST00000438297 472 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 RPS29P31-201ENST00000446147 164 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AL358232.1-201ENST00000448030 501 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 MTND2P19-201ENST00000449129 1012 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC073387.1-201ENST00000453261 709 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 SUMO2P2-201ENST00000456482 255 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 BTF3P5-201ENST00000457252 467 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC023598.1-201ENST00000472521 361 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC090453.1-201ENST00000495560 436 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 SETP14-201ENST00000497538 873 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 WBP1LP4-201ENST00000505043 344 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFRAP16234 AP006245.1-201ENST00000522549 120 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 AC087481.2-201ENST00000565492 330 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.71□□□□□ -1.82
PDGFRAP16234 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.71□□□□□ -1.82
PDGFRAP16234 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.71□□□□□ -1.82
PDGFRAP16234 AC006116.10-201ENST00000591836 581 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AC008739.3-201ENST00000603262 127 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 MIR6075-201ENST00000620782 95 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 AP001002.2-201ENST00000625137 386 ntBASIC3.71□□□□□ -1.82
PDGFRAP16234 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.71□□□□□ -1.82
PDGFRAP16234 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PDGFRAP16234 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms