Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXC6P09630 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXC6P09630 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
HOXC6P09630 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
HOXC6P09630 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC6P09630 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXC6P09630 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HOXC6P09630 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HOXC6P09630 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 RNU6-582P-201ENST00000362989 107 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 RNU6-984P-201ENST00000363236 109 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 CYCSP45-201ENST00000402289 315 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL133264.1-201ENST00000407157 562 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL160275.2-201ENST00000412010 394 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC6P09630 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 UBE2V1P10-201ENST00000414685 269 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC6P09630 RPS20P1-201ENST00000434853 354 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL353597.2-202ENST00000434901 373 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC005019.1-201ENST00000436455 431 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 LARP1BP3-201ENST00000437229 869 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 ELOCP10-201ENST00000440624 327 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 YWHAQP9-201ENST00000445891 512 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC6P09630 SRRM1P2-201ENST00000464531 1192 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
HOXC6P09630 AC017015.1-201ENST00000477387 286 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC109486.1-201ENST00000486833 374 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC025445.1-201ENST00000502728 300 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC6P09630 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC6P09630 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC6P09630 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC6P09630 AP002963.1-201ENST00000530590 184 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AP000873.5-201ENST00000533906 236 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC6P09630 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC6P09630 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
HOXC6P09630 MTND1P15-201ENST00000579262 949 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL390838.2-201ENST00000602394 274 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC008638.3-201ENST00000603341 463 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 ELOCP34-201ENST00000604436 327 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC112220.3-201ENST00000605502 502 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXC6P09630 AP004247.3-201ENST00000608682 624 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXC6P09630 AC018926.3-201ENST00000618841 406 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AC018755.4-201ENST00000619715 454 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 AL356266.1-201ENST00000623311 483 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXC6P09630 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXC6P09630 MFSD8-236ENST00000641509 4050 ntBASIC4.15□□□□□ -1.75
HOXC6P09630 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXC6P09630 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXC6P09630 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXC6P09630 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC6P09630 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC6P09630 AL356274.2-201ENST00000624379 3752 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 RNU6-1066P-201ENST00000363573 105 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 RNU6-374P-201ENST00000364146 108 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 RNU6-517P-201ENST00000384362 110 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 MIR708-201ENST00000390708 88 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AL663109.1-201ENST00000411498 844 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC6P09630 USP9YP33-201ENST00000412220 421 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 JKAMPP1-201ENST00000413804 919 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 CYCSP46-201ENST00000423569 204 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC6P09630 RPL31P54-201ENST00000429803 370 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 MED14P1-201ENST00000430517 648 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC6P09630 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC6P09630 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC6P09630 SNRPGP9-201ENST00000456025 225 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 ARPC3P2-201ENST00000457786 533 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 RNU6-1218P-201ENST00000458990 108 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 RPL23AP12-201ENST00000467573 473 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AC011825.1-201ENST00000484967 388 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AC005912.1-201ENST00000495392 255 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC6P09630 RNU6-720P-201ENST00000516363 108 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 RN7SKP283-201ENST00000517197 270 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC6P09630 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC6P09630 OR7K1P-201ENST00000546439 926 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXC6P09630 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC6P09630 AC138915.2-201ENST00000569776 97 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 MIR5186-201ENST00000577504 120 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC6P09630 AC123786.2-201ENST00000603459 275 ntBASIC4.14□□□□□ -1.75
HOXC6P09630 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC6P09630 MIR8058-201ENST00000615737 89 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms