Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.14□□□□□ -1.91
TPM1P09493 AC090525.1-201ENST00000479116 478 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
TPM1P09493 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM1P09493 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.14□□□□□ -1.91
TPM1P09493 HSPE1P20-201ENST00000538133 289 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AC093014.1-201ENST00000548926 724 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 MIR3605-201ENST00000583214 100 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AC006130.2-201ENST00000586202 326 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM1P09493 AC073968.1-201ENST00000618594 637 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.14□□□□□ -1.91
TPM1P09493 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM1P09493 AC011460.1-201ENST00000636268 1834 ntBASIC3.14□□□□□ -1.91
TPM1P09493 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TPM1P09493 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TPM1P09493 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
TPM1P09493 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TPM1P09493 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TPM1P09493 MTND4LP20-201ENST00000402379 270 ntBASIC3.13□□□□□ -1.91
TPM1P09493 FAT1P1-201ENST00000406588 507 ntBASIC3.13□□□□□ -1.91
TPM1P09493 RNU6-712P-201ENST00000410558 100 ntBASIC3.13□□□□□ -1.91
TPM1P09493 RPL7P8-201ENST00000411964 730 ntBASIC3.13□□□□□ -1.91
TPM1P09493 RAP1BP1-201ENST00000412709 553 ntBASIC3.13□□□□□ -1.91
TPM1P09493 RPL36AP36-201ENST00000418616 301 ntBASIC3.13□□□□□ -1.91
TPM1P09493 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.13□□□□□ -1.91
TPM1P09493 AC091862.1-201ENST00000438016 1100 ntBASIC3.13□□□□□ -1.91
TPM1P09493 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM1P09493 RPL23AP31-201ENST00000456160 467 ntBASIC3.13□□□□□ -1.91
TPM1P09493 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
TPM1P09493 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM1P09493 RN7SKP157-201ENST00000516174 282 ntBASIC3.13□□□□□ -1.91
TPM1P09493 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM1P09493 HIGD1AP6-201ENST00000521833 279 ntBASIC3.13□□□□□ -1.91
TPM1P09493 TRAV11-201ENST00000539512 339 ntBASIC3.13□□□□□ -1.91
TPM1P09493 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.13□□□□□ -1.91
TPM1P09493 AADACP1-206ENST00000561502 1193 ntBASIC3.13□□□□□ -1.91
TPM1P09493 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.13□□□□□ -1.91
TPM1P09493 AC022069.1-201ENST00000582910 658 ntBASIC3.13□□□□□ -1.91
TPM1P09493 NUTF2P8-201ENST00000604593 363 ntBASIC3.13□□□□□ -1.91
TPM1P09493 AL138880.2-201ENST00000616214 239 ntBASIC3.13□□□□□ -1.91
TPM1P09493 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.13□□□□□ -1.91
TPM1P09493 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TPM1P09493 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM1P09493 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM1P09493 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM1P09493 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.12□□□□□ -1.91
TPM1P09493 MIR26A1-201ENST00000362205 77 ntBASIC3.12□□□□□ -1.91
TPM1P09493 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TPM1P09493 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM1P09493 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
TPM1P09493 HMGN2P35-201ENST00000412164 270 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM1P09493 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.12□□□□□ -1.91
TPM1P09493 PAICSP7-201ENST00000419829 962 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC079780.1-201ENST00000428259 207 ntBASIC3.12□□□□□ -1.91
TPM1P09493 UBE2V2P3-201ENST00000433562 437 ntBASIC3.12□□□□□ -1.91
TPM1P09493 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM1P09493 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM1P09493 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.12□□□□□ -1.91
TPM1P09493 AC104073.1-201ENST00000451988 151 ntBASIC3.12□□□□□ -1.91
TPM1P09493 BTF3P5-201ENST00000457252 467 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC091153.1-201ENST00000466297 402 ntBASIC3.12□□□□□ -1.91
TPM1P09493 RPL32P34-201ENST00000486380 400 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM1P09493 OR8K4P-201ENST00000534608 872 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC126177.3-201ENST00000551839 688 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM1P09493 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM1P09493 AC091057.2-201ENST00000602594 792 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC016542.1-201ENST00000608259 493 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.12□□□□□ -1.91
TPM1P09493 FRG1HP-204ENST00000617940 757 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC068722.2-201ENST00000618734 544 ntBASIC3.12□□□□□ -1.91
TPM1P09493 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
TPM1P09493 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
TPM1P09493 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM1P09493 AL590396.2-201ENST00000636511 1041 ntBASIC3.12□□□□□ -1.91
TPM1P09493 MTND5P31-201ENST00000419366 1374 ntBASIC3.12□□□□□ -1.91
TPM1P09493 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TPM1P09493 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TPM1P09493 MTCO1P18-201ENST00000455518 1419 ntBASIC3.11□□□□□ -1.91
TPM1P09493 SNORA63.1-201ENST00000362493 131 ntBASIC3.11□□□□□ -1.91
TPM1P09493 SNORD21-201ENST00000383953 95 ntBASIC3.11□□□□□ -1.91
TPM1P09493 RNU6-730P-201ENST00000383954 104 ntBASIC3.11□□□□□ -1.91
TPM1P09493 SNORA1.3-201ENST00000384676 136 ntBASIC3.11□□□□□ -1.91
TPM1P09493 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
TPM1P09493 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TPM1P09493 AC099677.1-201ENST00000420575 175 ntBASIC3.11□□□□□ -1.91
TPM1P09493 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM1P09493 HMGN2P30-201ENST00000423237 256 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC022018.1-201ENST00000430685 241 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AC005189.1-201ENST00000431286 310 ntBASIC3.11□□□□□ -1.91
TPM1P09493 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM1P09493 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.11□□□□□ -1.91
TPM1P09493 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
TPM1P09493 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms