Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC040168.1-201ENST00000623594 991 ntBASIC4□□□□□ -1.77
RB1P06400 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4□□□□□ -1.77
RB1P06400 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4□□□□□ -1.77
RB1P06400 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RB1P06400 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RB1P06400 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4□□□□□ -1.77
RB1P06400 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
RB1P06400 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RB1P06400 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
RB1P06400 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RB1P06400 SNORD74.4-201ENST00000364129 80 ntBASIC3.99□□□□□ -1.77
RB1P06400 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 RSL24D1P4-201ENST00000400938 484 ntBASIC3.99□□□□□ -1.77
RB1P06400 DHFRP6-201ENST00000401776 268 ntBASIC3.99□□□□□ -1.77
RB1P06400 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.99□□□□□ -1.77
RB1P06400 USP9YP33-201ENST00000412220 421 ntBASIC3.99□□□□□ -1.77
RB1P06400 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 MTCYBP38-201ENST00000417160 1123 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC005005.2-201ENST00000420779 380 ntBASIC3.99□□□□□ -1.77
RB1P06400 AL953862.1-201ENST00000423016 168 ntBASIC3.99□□□□□ -1.77
RB1P06400 AL513174.1-201ENST00000423182 629 ntBASIC3.99□□□□□ -1.77
RB1P06400 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 USP9YP35-201ENST00000435696 412 ntBASIC3.99□□□□□ -1.77
RB1P06400 AL138799.3-201ENST00000438968 350 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC078817.1-201ENST00000492623 435 ntBASIC3.99□□□□□ -1.77
RB1P06400 AP001086.1-201ENST00000494882 321 ntBASIC3.99□□□□□ -1.77
RB1P06400 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 MTCYBP35-201ENST00000503630 1137 ntBASIC3.99□□□□□ -1.77
RB1P06400 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.99□□□□□ -1.77
RB1P06400 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.99□□□□□ -1.77
RB1P06400 SNORA3.4-201ENST00000515969 96 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.99□□□□□ -1.77
RB1P06400 AC103843.2-201ENST00000530523 682 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.99□□□□□ -1.77
RB1P06400 AC007458.1-201ENST00000542812 373 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 AC009094.1-201ENST00000564443 426 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC006270.2-201ENST00000578523 652 ntBASIC3.99□□□□□ -1.77
RB1P06400 AC110741.2-201ENST00000605278 268 ntBASIC3.99□□□□□ -1.77
RB1P06400 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.99□□□□□ -1.77
RB1P06400 AL355365.1-201ENST00000616480 294 ntBASIC3.99□□□□□ -1.77
RB1P06400 AL591424.2-201ENST00000617023 128 ntBASIC3.99□□□□□ -1.77
RB1P06400 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 AC119674.1-207ENST00000641355 633 ntBASIC3.99□□□□□ -1.77
RB1P06400 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.99□□□□□ -1.77
RB1P06400 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.99□□□□□ -1.77
RB1P06400 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RB1P06400 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RB1P06400 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
RB1P06400 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RB1P06400 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RB1P06400 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.98□□□□□ -1.77
RB1P06400 OR4G11P-202ENST00000642116 1414 ntBASIC3.98□□□□□ -1.77
RB1P06400 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RB1P06400 RNU6-931P-201ENST00000363850 107 ntBASIC3.98□□□□□ -1.77
RB1P06400 SNORA4.1-201ENST00000364263 144 ntBASIC3.98□□□□□ -1.77
RB1P06400 MIR490-201ENST00000384865 128 ntBASIC3.98□□□□□ -1.77
RB1P06400 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 PSMA6P3-201ENST00000428242 164 ntBASIC3.98□□□□□ -1.77
RB1P06400 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 RBMY2UP-201ENST00000453474 324 ntBASIC3.98□□□□□ -1.77
RB1P06400 USP9YP10-201ENST00000454868 628 ntBASIC3.98□□□□□ -1.77
RB1P06400 MTCO3P11-201ENST00000455103 774 ntBASIC3.98□□□□□ -1.77
RB1P06400 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 AC092451.1-201ENST00000480211 153 ntBASIC3.98□□□□□ -1.77
RB1P06400 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 USP9YP5-201ENST00000511770 630 ntBASIC3.98□□□□□ -1.77
RB1P06400 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 RNU6-27P-201ENST00000516146 107 ntBASIC3.98□□□□□ -1.77
RB1P06400 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
RB1P06400 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.98□□□□□ -1.77
RB1P06400 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.98□□□□□ -1.77
RB1P06400 Z99289.3-201ENST00000605586 594 ntBASIC3.98□□□□□ -1.77
RB1P06400 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RB1P06400 AC012531.5-201ENST00000611375 151 ntBASIC3.98□□□□□ -1.77
RB1P06400 AL450489.1-201ENST00000612071 468 ntBASIC3.98□□□□□ -1.77
RB1P06400 AL139418.1-201ENST00000613613 177 ntBASIC3.98□□□□□ -1.77
RB1P06400 AC009464.1-201ENST00000615731 469 ntBASIC3.98□□□□□ -1.77
RB1P06400 AC007490.1-201ENST00000624321 703 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms