Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU1-30P-201ENST00000606575 163 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 AC131235.4-201ENST00000609288 620 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 MIR6748-201ENST00000610433 71 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 AL139418.1-201ENST00000613613 177 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 ZYXP1-201ENST00000617638 118 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 AC116618.1-201ENST00000634617 774 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 AC138915.3-201ENST00000562908 1389 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
MT-ND1P03886 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MT-ND1P03886 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
MT-ND1P03886 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
MT-ND1P03886 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
MT-ND1P03886 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
MT-ND1P03886 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
MT-ND1P03886 NUP58P1-201ENST00000502546 1738 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
MT-ND1P03886 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 FAM133CP-201ENST00000332869 704 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 SNORA70.2-201ENST00000364506 135 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.31□□□□□ -1.88
MT-ND1P03886 AL450338.1-201ENST00000407987 512 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 U3.39-201ENST00000408569 239 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.31□□□□□ -1.88
MT-ND1P03886 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.31□□□□□ -1.88
MT-ND1P03886 MTCO3P1-205ENST00000422088 832 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.31□□□□□ -1.88
MT-ND1P03886 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 H2AFZP6-201ENST00000444403 394 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.31□□□□□ -1.88
MT-ND1P03886 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.31□□□□□ -1.88
MT-ND1P03886 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.31□□□□□ -1.88
MT-ND1P03886 VN1R105P-201ENST00000486595 910 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.31□□□□□ -1.88
MT-ND1P03886 BOLA3P3-201ENST00000505182 232 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AC079395.1-201ENST00000510981 262 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.31□□□□□ -1.88
MT-ND1P03886 RNU6-1261P-201ENST00000517194 104 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AP000926.4-201ENST00000527351 454 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 HIGD1AP10-201ENST00000527837 282 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 UBTFL10-201ENST00000528532 562 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AP000619.3-201ENST00000535634 1127 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.31□□□□□ -1.88
MT-ND1P03886 OR8R1P-201ENST00000543943 764 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.31□□□□□ -1.88
MT-ND1P03886 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.31□□□□□ -1.88
MT-ND1P03886 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 SNORD84-203ENST00000584275 78 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.31□□□□□ -1.88
MT-ND1P03886 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 AC092954.1-201ENST00000609121 445 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 VIS1.1-201ENST00000610517 203 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AC097478.2-201ENST00000610572 514 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 TUSC7.1-201ENST00000610969 165 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AL450489.1-201ENST00000612071 468 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AC005332.6-201ENST00000613178 446 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.31□□□□□ -1.88
MT-ND1P03886 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.31□□□□□ -1.88
MT-ND1P03886 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.31□□□□□ -1.88
MT-ND1P03886 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.31□□□□□ -1.88
MT-ND1P03886 AC007256.1-201ENST00000392253 2765 ntBASIC3.31□□□□□ -1.88
MT-ND1P03886 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MT-ND1P03886 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
MT-ND1P03886 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC002546.1-201ENST00000588041 2504 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 SNORA51.6-201ENST00000384151 125 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 RNU6-757P-201ENST00000410334 100 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.3□□□□□ -1.88
MT-ND1P03886 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
MT-ND1P03886 MTCO1P48-201ENST00000448024 1096 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 PLGLA-201ENST00000465668 449 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AC004263.1-201ENST00000479327 332 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 RNU1-61P-201ENST00000516107 151 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 RNU2-27P-201ENST00000516185 142 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AP001189.2-201ENST00000527320 189 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC090502.2-201ENST00000549267 280 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 DUXAP1-201ENST00000556632 463 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 PARP1P2-201ENST00000556806 195 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC087481.2-201ENST00000565492 330 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AL354943.1-201ENST00000572103 781 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms