Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC022790.1-201ENST00000522872 204 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 AP000867.2-201ENST00000532468 320 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.82□□□□□ -1.96
COL1A1P02452 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.82□□□□□ -1.96
COL1A1P02452 AL161713.1-201ENST00000555538 145 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.82□□□□□ -1.96
COL1A1P02452 MIR5007-201ENST00000583098 95 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 ADAM3A-203ENST00000461344 2157 ntBASIC2.82□□□□□ -1.96
COL1A1P02452 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL1A1P02452 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 AC002543.1-201ENST00000299783 1954 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL1A1P02452 FRG1BP-201ENST00000278882 761 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL1A1P02452 MTCO3P21-201ENST00000430791 643 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 UBE2V2P4-201ENST00000447495 259 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 AC010683.1-201ENST00000473673 378 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.81□□□□□ -1.96
COL1A1P02452 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.81□□□□□ -1.96
COL1A1P02452 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.81□□□□□ -1.96
COL1A1P02452 SNRPGP18-201ENST00000553000 214 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 NRBF2P1-201ENST00000587407 859 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.81□□□□□ -1.96
COL1A1P02452 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.81□□□□□ -1.96
COL1A1P02452 AC110994.2-201ENST00000635481 492 ntBASIC2.81□□□□□ -1.96
COL1A1P02452 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.81□□□□□ -1.96
COL1A1P02452 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL1A1P02452 AC117529.2-201ENST00000512159 2068 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.8□□□□□ -1.96
COL1A1P02452 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
COL1A1P02452 MIR21-201ENST00000362134 72 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 Y_RNA.338-201ENST00000365320 114 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 SNORA81-201ENST00000408493 178 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 RPL23AP62-201ENST00000463396 453 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.8□□□□□ -1.96
COL1A1P02452 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 RPL23AP49-201ENST00000492925 468 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL1A1P02452 AC026412.2-201ENST00000512270 1075 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.8□□□□□ -1.96
COL1A1P02452 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.8□□□□□ -1.96
COL1A1P02452 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.8□□□□□ -1.96
COL1A1P02452 NF1P5-201ENST00000588287 448 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.8□□□□□ -1.96
COL1A1P02452 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.8□□□□□ -1.96
COL1A1P02452 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
COL1A1P02452 AL162233.1-201ENST00000620014 944 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 MIR6873-201ENST00000622788 63 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL1A1P02452 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.8□□□□□ -1.96
COL1A1P02452 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL1A1P02452 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL1A1P02452 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 Y_RNA.508-201ENST00000384502 114 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.79□□□□□ -1.96
COL1A1P02452 ZNF355P-201ENST00000427301 3216 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 RPS15AP28-201ENST00000435088 386 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.79□□□□□ -1.96
COL1A1P02452 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
COL1A1P02452 RPL36AP21-201ENST00000490372 323 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 TRAV31-201ENST00000502780 342 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.79□□□□□ -1.96
COL1A1P02452 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.79□□□□□ -1.96
COL1A1P02452 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.79□□□□□ -1.96
COL1A1P02452 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.79□□□□□ -1.96
COL1A1P02452 NF1P10-201ENST00000613227 742 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.79□□□□□ -1.96
COL1A1P02452 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL1A1P02452 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL1A1P02452 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL1A1P02452 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 RNU6-76P-201ENST00000384060 104 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 MIR92A2-201ENST00000385299 75 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL1A1P02452 TRGV6-201ENST00000417928 299 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 PTP4A1P7-201ENST00000423476 514 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.78□□□□□ -1.96
COL1A1P02452 AC098826.1-201ENST00000433943 471 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.78□□□□□ -1.96
COL1A1P02452 HMGN2P23-201ENST00000456759 269 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 OR4G11P-201ENST00000492842 939 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 AC010627.1-201ENST00000503819 1294 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.78□□□□□ -1.96
COL1A1P02452 AC104090.1-201ENST00000506341 1171 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.78□□□□□ -1.96
COL1A1P02452 AC112673.1-201ENST00000513168 575 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 HSPE1P18-201ENST00000517602 280 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.78□□□□□ -1.96
COL1A1P02452 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.78□□□□□ -1.96
COL1A1P02452 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.78□□□□□ -1.96
COL1A1P02452 AC099778.2-201ENST00000610904 211 ntBASIC2.78□□□□□ -1.96
COL1A1P02452 AC123768.4-201ENST00000616244 701 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms