Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RSL24D1P2-201ENST00000445584 366 ntBASIC2.37□□□□□ -2.03
TNFP01375 CALM1P2-201ENST00000452941 448 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC146507.1-201ENST00000468335 354 ntBASIC2.37□□□□□ -2.03
TNFP01375 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.37□□□□□ -2.03
TNFP01375 RPS27AP9-201ENST00000477681 438 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.37□□□□□ -2.03
TNFP01375 AC008549.1-201ENST00000512900 643 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFP01375 RNU6-826P-201ENST00000516827 104 ntBASIC2.37□□□□□ -2.03
TNFP01375 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.37□□□□□ -2.03
TNFP01375 OR5AK3P-201ENST00000527486 1297 ntBASIC2.37□□□□□ -2.03
TNFP01375 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.37□□□□□ -2.03
TNFP01375 OR7K1P-201ENST00000546439 926 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC009063.1-201ENST00000563342 702 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.37□□□□□ -2.03
TNFP01375 AL713998.2-201ENST00000604538 1198 ntBASIC2.37□□□□□ -2.03
TNFP01375 AL355816.1-201ENST00000607951 118 ntBASIC2.37□□□□□ -2.03
TNFP01375 AL390240.1-201ENST00000612950 384 ntBASIC2.37□□□□□ -2.03
TNFP01375 AC004696.1-201ENST00000614345 607 ntBASIC2.37□□□□□ -2.03
TNFP01375 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
TNFP01375 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TNFP01375 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TNFP01375 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.36□□□□□ -2.03
TNFP01375 AC096656.1-201ENST00000623826 1364 ntBASIC2.36□□□□□ -2.03
TNFP01375 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TNFP01375 AC092435.3-201ENST00000565538 3654 ntBASIC2.36□□□□□ -2.03
TNFP01375 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
TNFP01375 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
TNFP01375 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFP01375 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFP01375 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFP01375 U8.2-201ENST00000363156 134 ntBASIC2.36□□□□□ -2.03
TNFP01375 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
TNFP01375 RNU2-71P-201ENST00000411395 189 ntBASIC2.36□□□□□ -2.03
TNFP01375 AL135786.1-201ENST00000415892 214 ntBASIC2.36□□□□□ -2.03
TNFP01375 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFP01375 AC098826.1-201ENST00000433943 471 ntBASIC2.36□□□□□ -2.03
TNFP01375 UBE2D3P1-201ENST00000436669 444 ntBASIC2.36□□□□□ -2.03
TNFP01375 ST13P20-201ENST00000447996 1065 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFP01375 RPL30P11-201ENST00000495304 339 ntBASIC2.36□□□□□ -2.03
TNFP01375 ANXA2P1-201ENST00000505539 926 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFP01375 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFP01375 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFP01375 ELOCP31-201ENST00000540463 467 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC010620.2-201ENST00000600135 313 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC091057.2-201ENST00000602594 792 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC015849.6-201ENST00000605454 474 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC046143.2-201ENST00000609789 160 ntBASIC2.36□□□□□ -2.03
TNFP01375 AC010809.3-201ENST00000621310 641 ntBASIC2.36□□□□□ -2.03
TNFP01375 CRYM-AS1-204ENST00000637983 556 ntBASIC2.36□□□□□ -2.03
TNFP01375 AL136520.1-201ENST00000600311 1322 ntBASIC2.36□□□□□ -2.03
TNFP01375 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TNFP01375 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TNFP01375 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TNFP01375 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
TNFP01375 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFP01375 AL590290.1-201ENST00000405336 380 ntBASIC2.35□□□□□ -2.03
TNFP01375 AL162578.1-201ENST00000406202 378 ntBASIC2.35□□□□□ -2.03
TNFP01375 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.35□□□□□ -2.03
TNFP01375 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFP01375 RNA5SP425-201ENST00000410336 112 ntBASIC2.35□□□□□ -2.03
TNFP01375 AC007064.1-201ENST00000412238 351 ntBASIC2.35□□□□□ -2.03
TNFP01375 RAP1BP1-201ENST00000412709 553 ntBASIC2.35□□□□□ -2.03
TNFP01375 SMC4P1-201ENST00000414479 527 ntBASIC2.35□□□□□ -2.03
TNFP01375 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFP01375 AC241520.1-201ENST00000422654 1099 ntBASIC2.35□□□□□ -2.03
TNFP01375 XKRYP6-201ENST00000440468 1116 ntBASIC2.35□□□□□ -2.03
TNFP01375 XKRYP3-201ENST00000442113 1116 ntBASIC2.35□□□□□ -2.03
TNFP01375 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFP01375 AC008571.1-201ENST00000467232 300 ntBASIC2.35□□□□□ -2.03
TNFP01375 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFP01375 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFP01375 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFP01375 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.35□□□□□ -2.03
TNFP01375 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.35□□□□□ -2.03
TNFP01375 AC245128.3-201ENST00000594721 748 ntBASIC2.35□□□□□ -2.03
TNFP01375 AL161912.3-201ENST00000605404 628 ntBASIC2.35□□□□□ -2.03
TNFP01375 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.35□□□□□ -2.03
TNFP01375 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFP01375 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFP01375 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.03
TNFP01375 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFP01375 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TNFP01375 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
TNFP01375 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFP01375 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TNFP01375 MTND4P13-201ENST00000402078 1023 ntBASIC2.34□□□□□ -2.03
TNFP01375 SNORA3.2-201ENST00000408221 125 ntBASIC2.34□□□□□ -2.03
TNFP01375 AC013404.1-201ENST00000413068 249 ntBASIC2.34□□□□□ -2.03
TNFP01375 AL158825.1-201ENST00000414735 521 ntBASIC2.34□□□□□ -2.03
TNFP01375 RPL36AP51-201ENST00000487216 318 ntBASIC2.34□□□□□ -2.03
TNFP01375 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFP01375 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFP01375 AC026412.2-201ENST00000512270 1075 ntBASIC2.34□□□□□ -2.03
TNFP01375 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms