Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.7□□□□□ -1.82
PCF11O94913 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.7□□□□□ -1.82
PCF11O94913 AC067747.1-201ENST00000608026 250 ntBASIC3.7□□□□□ -1.82
PCF11O94913 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCF11O94913 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCF11O94913 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PCF11O94913 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PCF11O94913 RNU1-17P-201ENST00000363022 152 ntBASIC3.69□□□□□ -1.82
PCF11O94913 RNA5SP239-201ENST00000410218 129 ntBASIC3.69□□□□□ -1.82
PCF11O94913 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.69□□□□□ -1.82
PCF11O94913 Z82205.1-201ENST00000428456 297 ntBASIC3.69□□□□□ -1.82
PCF11O94913 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.69□□□□□ -1.82
PCF11O94913 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.69□□□□□ -1.82
PCF11O94913 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.69□□□□□ -1.82
PCF11O94913 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
PCF11O94913 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.69□□□□□ -1.82
PCF11O94913 ELOCP31-201ENST00000540463 467 ntBASIC3.69□□□□□ -1.82
PCF11O94913 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.69□□□□□ -1.82
PCF11O94913 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.69□□□□□ -1.82
PCF11O94913 AP004247.3-201ENST00000608682 624 ntBASIC3.69□□□□□ -1.82
PCF11O94913 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.69□□□□□ -1.82
PCF11O94913 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.69□□□□□ -1.82
PCF11O94913 MTND5P27-201ENST00000428871 1720 ntBASIC3.69□□□□□ -1.82
PCF11O94913 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCF11O94913 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PCF11O94913 AC110792.3-201ENST00000595906 1614 ntBASIC3.68□□□□□ -1.82
PCF11O94913 FRG1BP-201ENST00000278882 761 ntBASIC3.68□□□□□ -1.82
PCF11O94913 RNU6-225P-201ENST00000384613 103 ntBASIC3.68□□□□□ -1.82
PCF11O94913 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.68□□□□□ -1.82
PCF11O94913 CACYBPP1-201ENST00000438592 684 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AC009969.1-201ENST00000438726 172 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.68□□□□□ -1.82
PCF11O94913 TAF9P1-201ENST00000445421 515 ntBASIC3.68□□□□□ -1.82
PCF11O94913 NDUFS5P3-201ENST00000450668 321 ntBASIC3.68□□□□□ -1.82
PCF11O94913 TAF9P2-201ENST00000454958 515 ntBASIC3.68□□□□□ -1.82
PCF11O94913 RNU7-170P-201ENST00000459303 61 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AP000926.1-201ENST00000479573 241 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AC055855.1-201ENST00000489563 579 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.68□□□□□ -1.82
PCF11O94913 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.68□□□□□ -1.82
PCF11O94913 VN1R79P-201ENST00000593540 513 ntBASIC3.68□□□□□ -1.82
PCF11O94913 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.68□□□□□ -1.82
PCF11O94913 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
PCF11O94913 AC097714.1-201ENST00000511272 1647 ntBASIC3.68□□□□□ -1.82
PCF11O94913 U8.13-201ENST00000390842 128 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AL590084.1-201ENST00000407885 387 ntBASIC3.68□□□□□ -1.82
PCF11O94913 TRGV6-201ENST00000417928 299 ntBASIC3.68□□□□□ -1.82
PCF11O94913 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCF11O94913 RPL23AP16-201ENST00000441715 421 ntBASIC3.68□□□□□ -1.82
PCF11O94913 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCF11O94913 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCF11O94913 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.68□□□□□ -1.82
PCF11O94913 SNORA70.14-201ENST00000516205 110 ntBASIC3.68□□□□□ -1.82
PCF11O94913 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.68□□□□□ -1.82
PCF11O94913 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.68□□□□□ -1.82
PCF11O94913 AC008083.2-201ENST00000546707 476 ntBASIC3.68□□□□□ -1.82
PCF11O94913 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
PCF11O94913 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCF11O94913 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCF11O94913 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCF11O94913 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCF11O94913 SNORD21-201ENST00000383953 95 ntBASIC3.67□□□□□ -1.82
PCF11O94913 NPM1P10-201ENST00000398310 865 ntBASIC3.67□□□□□ -1.82
PCF11O94913 SDCBPP3-201ENST00000419629 891 ntBASIC3.67□□□□□ -1.82
PCF11O94913 AC108667.1-201ENST00000428618 249 ntBASIC3.67□□□□□ -1.82
PCF11O94913 AL390023.1-201ENST00000428836 262 ntBASIC3.67□□□□□ -1.82
PCF11O94913 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PCF11O94913 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.67□□□□□ -1.82
PCF11O94913 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.67□□□□□ -1.82
PCF11O94913 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
PCF11O94913 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.67□□□□□ -1.82
PCF11O94913 MIR4716-201ENST00000579628 84 ntBASIC3.67□□□□□ -1.82
PCF11O94913 AL160394.1-201ENST00000624765 724 ntBASIC3.67□□□□□ -1.82
PCF11O94913 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
PCF11O94913 SNORA41-201ENST00000384675 132 ntBASIC3.66□□□□□ -1.82
PCF11O94913 SNORA17.3-201ENST00000391159 129 ntBASIC3.66□□□□□ -1.82
PCF11O94913 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCF11O94913 ELOCP13-201ENST00000443934 329 ntBASIC3.66□□□□□ -1.82
PCF11O94913 HMGB3P21-201ENST00000452483 547 ntBASIC3.66□□□□□ -1.82
PCF11O94913 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.66□□□□□ -1.82
PCF11O94913 AC091917.2-201ENST00000505002 744 ntBASIC3.66□□□□□ -1.82
PCF11O94913 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.66□□□□□ -1.82
PCF11O94913 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.66□□□□□ -1.82
PCF11O94913 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.66□□□□□ -1.82
PCF11O94913 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.66□□□□□ -1.82
PCF11O94913 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.66□□□□□ -1.82
PCF11O94913 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.66□□□□□ -1.82
PCF11O94913 MIR6845-201ENST00000613182 61 ntBASIC3.66□□□□□ -1.82
PCF11O94913 MIR6766-201ENST00000622641 72 ntBASIC3.66□□□□□ -1.82
PCF11O94913 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCF11O94913 AC009501.3-201ENST00000605001 1352 ntBASIC3.66□□□□□ -1.82
PCF11O94913 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCF11O94913 Z99496.1-201ENST00000469424 1477 ntBASIC3.65□□□□□ -1.82
PCF11O94913 RNY1P10-201ENST00000363268 113 ntBASIC3.65□□□□□ -1.82
PCF11O94913 SNORA25.9-201ENST00000365087 128 ntBASIC3.65□□□□□ -1.82
PCF11O94913 AL591416.1-201ENST00000404015 867 ntBASIC3.65□□□□□ -1.82
PCF11O94913 AC093151.1-201ENST00000427711 313 ntBASIC3.65□□□□□ -1.82
PCF11O94913 AL024509.2-201ENST00000493462 493 ntBASIC3.65□□□□□ -1.82
PCF11O94913 RPS27P27-201ENST00000498779 255 ntBASIC3.65□□□□□ -1.82
PCF11O94913 AC111000.5-201ENST00000506559 1178 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms