Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU1-61P-201ENST00000516107 151 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.9□□□□□ -1.95
SHOX2O60902 CIR1P1-201ENST00000524055 1133 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.9□□□□□ -1.95
SHOX2O60902 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.9□□□□□ -1.95
SHOX2O60902 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.9□□□□□ -1.95
SHOX2O60902 AC231759.1-201ENST00000616455 597 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC025016.1-201ENST00000616746 682 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 CYCSP41-201ENST00000616920 296 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC017104.5-201ENST00000637647 639 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SHOX2O60902 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHOX2O60902 AL359893.1-201ENST00000447628 1580 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHOX2O60902 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC073055.1-201ENST00000456901 1621 ntBASIC2.9□□□□□ -1.95
SHOX2O60902 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHOX2O60902 ANKRD36P1-201ENST00000344424 659 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 UBA52P6-201ENST00000399822 382 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AL592114.1-201ENST00000403842 483 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 UBE2V1P11-201ENST00000411559 285 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AC092638.1-201ENST00000411966 1275 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.89□□□□□ -1.95
SHOX2O60902 AL096701.2-201ENST00000416920 238 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.89□□□□□ -1.95
SHOX2O60902 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.89□□□□□ -1.95
SHOX2O60902 SRIP2-201ENST00000428470 166 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 YWHAZP8-201ENST00000436935 731 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.89□□□□□ -1.95
SHOX2O60902 AC127537.2-201ENST00000439258 465 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 XKRY2-201ENST00000442362 1093 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AC011979.1-201ENST00000472300 483 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.89□□□□□ -1.95
SHOX2O60902 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AC233702.1-201ENST00000482905 502 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 RPS3AP14-201ENST00000483907 780 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 HMGB1P22-201ENST00000505315 124 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 HSPD1P15-201ENST00000505573 1122 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 MTCYBP37-201ENST00000510642 1133 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
SHOX2O60902 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
SHOX2O60902 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHOX2O60902 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.89□□□□□ -1.95
SHOX2O60902 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.89□□□□□ -1.95
SHOX2O60902 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.89□□□□□ -1.95
SHOX2O60902 AC079880.2-201ENST00000603790 1213 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 VIS1.1-201ENST00000610517 203 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHOX2O60902 AL355365.1-201ENST00000616480 294 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.89□□□□□ -1.95
SHOX2O60902 AC090617.9-201ENST00000623751 147 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.89□□□□□ -1.95
SHOX2O60902 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SHOX2O60902 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
SHOX2O60902 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.89□□□□□ -1.95
SHOX2O60902 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHOX2O60902 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHOX2O60902 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHOX2O60902 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
SHOX2O60902 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 AC016716.1-201ENST00000265882 708 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 RNU6-50P-201ENST00000362356 103 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 DEFB109C-201ENST00000382575 264 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 DEFB109B-201ENST00000382656 264 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 RPL19P1-201ENST00000411635 428 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC073310.1-201ENST00000423226 1033 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 RPL7P44-201ENST00000424827 742 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AL590623.1-201ENST00000427864 105 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC005189.1-201ENST00000431286 310 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC004865.1-201ENST00000442276 1003 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 CYCSP35-201ENST00000451978 304 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 AL035407.2-201ENST00000454090 378 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.88□□□□□ -1.95
SHOX2O60902 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.88□□□□□ -1.95
SHOX2O60902 RNU6-488P-201ENST00000515918 99 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 RNA5SP468-201ENST00000516782 93 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 EIF4BP1-201ENST00000554881 351 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SHOX2O60902 AC104763.2-201ENST00000604179 382 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 RPL23AP88-201ENST00000605759 454 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 BX664608.1-201ENST00000610519 487 ntBASIC2.88□□□□□ -1.95
SHOX2O60902 TUG1_1.1-201ENST00000610654 145 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms