Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SKP44-201ENST00000363602 316 ntBASIC3.57□□□□□ -1.84
PRKNO60260 RNU6-289P-201ENST00000364093 107 ntBASIC3.57□□□□□ -1.84
PRKNO60260 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 U8.11-201ENST00000384699 133 ntBASIC3.57□□□□□ -1.84
PRKNO60260 U8.12-201ENST00000384701 133 ntBASIC3.57□□□□□ -1.84
PRKNO60260 MIR93-201ENST00000385024 80 ntBASIC3.57□□□□□ -1.84
PRKNO60260 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
PRKNO60260 RN7SKP156-201ENST00000410308 342 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC004987.3-201ENST00000413879 771 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AL139247.1-201ENST00000422768 325 ntBASIC3.57□□□□□ -1.84
PRKNO60260 NPM1P34-201ENST00000428821 893 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AL512649.1-201ENST00000428997 581 ntBASIC3.57□□□□□ -1.84
PRKNO60260 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AC011742.1-201ENST00000431448 434 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.57□□□□□ -1.84
PRKNO60260 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 KCTD9P3-201ENST00000434597 1169 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 SNRPEP7-201ENST00000438350 220 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 BMI1P1-201ENST00000445879 941 ntBASIC3.57□□□□□ -1.84
PRKNO60260 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRKNO60260 AL645939.1-201ENST00000453429 797 ntBASIC3.57□□□□□ -1.84
PRKNO60260 U8.18-201ENST00000459285 133 ntBASIC3.57□□□□□ -1.84
PRKNO60260 RPL21P11-201ENST00000461458 483 ntBASIC3.57□□□□□ -1.84
PRKNO60260 RPS20P21-201ENST00000466859 343 ntBASIC3.57□□□□□ -1.84
PRKNO60260 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 SAP18P1-201ENST00000512058 390 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 AC016065.2-201ENST00000514530 444 ntBASIC3.57□□□□□ -1.84
PRKNO60260 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.57□□□□□ -1.84
PRKNO60260 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AL122126.1-201ENST00000546905 1318 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AGGF1P4-201ENST00000568249 801 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRKNO60260 MIR5186-201ENST00000577504 120 ntBASIC3.57□□□□□ -1.84
PRKNO60260 MIR1254-2-201ENST00000579553 63 ntBASIC3.57□□□□□ -1.84
PRKNO60260 MIR548AB-201ENST00000584917 84 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AC067852.4-201ENST00000590314 478 ntBASIC3.57□□□□□ -1.84
PRKNO60260 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 AC244505.7-201ENST00000599675 272 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC025165.5-201ENST00000602802 578 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC010680.4-201ENST00000605334 543 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AL159169.3-201ENST00000608871 561 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC128687.2-201ENST00000609657 566 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 AC025594.3-201ENST00000613068 790 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC010678.1-201ENST00000614118 713 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC130650.2-201ENST00000618736 2403 ntBASIC3.57□□□□□ -1.84
PRKNO60260 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.57□□□□□ -1.84
PRKNO60260 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKNO60260 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.56□□□□□ -1.84
PRKNO60260 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 AL022578.1-201ENST00000439330 1433 ntBASIC3.56□□□□□ -1.84
PRKNO60260 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PRKNO60260 SNORD3H-201ENST00000384486 214 ntBASIC3.56□□□□□ -1.84
PRKNO60260 MIR199A2-201ENST00000385289 110 ntBASIC3.56□□□□□ -1.84
PRKNO60260 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 HMGB1P17-201ENST00000403495 628 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AL024474.1-201ENST00000404655 591 ntBASIC3.56□□□□□ -1.84
PRKNO60260 SNORA3.3-201ENST00000408712 125 ntBASIC3.56□□□□□ -1.84
PRKNO60260 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKNO60260 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.56□□□□□ -1.84
PRKNO60260 AL035410.1-201ENST00000427409 427 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC096638.2-201ENST00000434965 711 ntBASIC3.56□□□□□ -1.84
PRKNO60260 LSM1P1-201ENST00000438629 273 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 USP9YP29-201ENST00000445112 563 ntBASIC3.56□□□□□ -1.84
PRKNO60260 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKNO60260 AL500522.2-201ENST00000448562 343 ntBASIC3.56□□□□□ -1.84
PRKNO60260 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKNO60260 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 PLGLA-201ENST00000465668 449 ntBASIC3.56□□□□□ -1.84
PRKNO60260 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 AC007537.2-201ENST00000472093 511 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKNO60260 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKNO60260 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.56□□□□□ -1.84
PRKNO60260 RAC1P2-201ENST00000511164 579 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms