Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL596245.1-201ENST00000618994 362 ntBASIC3.63□□□□□ -1.83
SSX4O60224 PCMTD1P7-201ENST00000634506 357 ntBASIC3.63□□□□□ -1.83
SSX4O60224 OR8B1P-202ENST00000641132 1178 ntBASIC3.63□□□□□ -1.83
SSX4O60224 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 AC244517.1-201ENST00000606030 2086 ntBASIC3.63□□□□□ -1.83
SSX4O60224 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSX4O60224 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SSX4O60224 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX4O60224 AC066616.2-201ENST00000559334 1481 ntBASIC3.62□□□□□ -1.83
SSX4O60224 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX4O60224 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX4O60224 RNU6-335P-201ENST00000364563 113 ntBASIC3.62□□□□□ -1.83
SSX4O60224 RNU6-660P-201ENST00000364566 109 ntBASIC3.62□□□□□ -1.83
SSX4O60224 SNORA62.3-201ENST00000365110 153 ntBASIC3.62□□□□□ -1.83
SSX4O60224 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX4O60224 AC007066.1-201ENST00000392902 381 ntBASIC3.62□□□□□ -1.83
SSX4O60224 RNU6-712P-201ENST00000410558 100 ntBASIC3.62□□□□□ -1.83
SSX4O60224 RN7SKP182-201ENST00000410772 298 ntBASIC3.62□□□□□ -1.83
SSX4O60224 HSFY4P-201ENST00000415994 1181 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX4O60224 AL157831.1-201ENST00000426134 473 ntBASIC3.62□□□□□ -1.83
SSX4O60224 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 LSM1P1-201ENST00000438629 273 ntBASIC3.62□□□□□ -1.83
SSX4O60224 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSX4O60224 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX4O60224 AL353691.1-201ENST00000451332 387 ntBASIC3.62□□□□□ -1.83
SSX4O60224 RAD23BP3-201ENST00000454157 1152 ntBASIC3.62□□□□□ -1.83
SSX4O60224 RPL30P6-201ENST00000475925 342 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC017015.1-201ENST00000477387 286 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 AC112198.1-201ENST00000505369 1220 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC111000.2-201ENST00000507775 550 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX4O60224 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX4O60224 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSX4O60224 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX4O60224 RN7SL600P-201ENST00000581811 299 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC010928.3-201ENST00000587712 541 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX4O60224 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX4O60224 AL163642.2-201ENST00000604722 1019 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC010738.1-201ENST00000604970 987 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC008121.2-201ENST00000614647 523 ntBASIC3.62□□□□□ -1.83
SSX4O60224 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX4O60224 AC092192.1-201ENST00000633154 1018 ntBASIC3.62□□□□□ -1.83
SSX4O60224 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX4O60224 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX4O60224 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SSX4O60224 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.61□□□□□ -1.83
SSX4O60224 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SSX4O60224 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
SSX4O60224 RNU6-500P-201ENST00000362349 107 ntBASIC3.61□□□□□ -1.83
SSX4O60224 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
SSX4O60224 Y_RNA.560-201ENST00000384689 102 ntBASIC3.61□□□□□ -1.83
SSX4O60224 RPL21P65-201ENST00000406094 466 ntBASIC3.61□□□□□ -1.83
SSX4O60224 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.61□□□□□ -1.83
SSX4O60224 RPL23AP39-201ENST00000415533 405 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AL356095.1-201ENST00000417217 199 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.61□□□□□ -1.83
SSX4O60224 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX4O60224 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX4O60224 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.61□□□□□ -1.83
SSX4O60224 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSX4O60224 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.61□□□□□ -1.83
SSX4O60224 RPL7P1-201ENST00000468161 747 ntBASIC3.61□□□□□ -1.83
SSX4O60224 RPL7P9-201ENST00000468715 747 ntBASIC3.61□□□□□ -1.83
SSX4O60224 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
SSX4O60224 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.61□□□□□ -1.83
SSX4O60224 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX4O60224 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX4O60224 AC005178.1-201ENST00000508392 440 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX4O60224 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
SSX4O60224 NDUFB4P9-201ENST00000511646 388 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 MTND5P4-201ENST00000514978 288 ntBASIC3.61□□□□□ -1.83
SSX4O60224 RNU1-45P-201ENST00000517191 141 ntBASIC3.61□□□□□ -1.83
SSX4O60224 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX4O60224 AC087373.1-201ENST00000524920 491 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AP004371.1-201ENST00000525240 214 ntBASIC3.61□□□□□ -1.83
SSX4O60224 OR5AP1P-201ENST00000529730 940 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC126177.3-201ENST00000551839 688 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.61□□□□□ -1.83
SSX4O60224 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX4O60224 AC090615.1-201ENST00000577519 154 ntBASIC3.61□□□□□ -1.83
SSX4O60224 AC008088.1-201ENST00000580993 280 ntBASIC3.61□□□□□ -1.83
SSX4O60224 BNIP3P22-201ENST00000593399 556 ntBASIC3.61□□□□□ -1.83
SSX4O60224 XIAPP1-201ENST00000603162 600 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms