Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ATP5A1P2-201ENST00000412323 255 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 MTATP6P27-201ENST00000416987 621 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A1O00337 TIMM9P2-201ENST00000419324 266 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A1O00337 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC013410.2-201ENST00000422627 201 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC28A1O00337 RPL23AP82-202ENST00000427528 469 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC004975.1-201ENST00000428733 208 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AL590233.1-201ENST00000430017 456 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 MUPP-201ENST00000438111 566 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.35□□□□□ -1.87
SLC28A1O00337 Z82190.1-201ENST00000454534 490 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 MTCO3P11-201ENST00000455103 774 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 NECAP1P2-201ENST00000455668 727 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 CENPBD1P1-201ENST00000464061 469 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC078785.3-201ENST00000476607 425 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 RPL7P38-201ENST00000488396 739 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A1O00337 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A1O00337 COX7A2P2-201ENST00000505291 250 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 KLHL2P1-201ENST00000508691 521 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 XKRY-201ENST00000510392 1100 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A1O00337 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A1O00337 SETP7-201ENST00000552169 453 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 OR4K7P-201ENST00000580232 945 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC011458.1-201ENST00000604034 617 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC109809.1-201ENST00000619665 545 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AL356585.4-201ENST00000623078 1229 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A1O00337 ZNF542P-204ENST00000482727 1305 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A1O00337 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC28A1O00337 AC017071.1-201ENST00000564407 2204 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC099786.3-201ENST00000565735 1410 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SLC28A1O00337 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A1O00337 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A1O00337 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A1O00337 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A1O00337 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SLC28A1O00337 SNORD116.1-201ENST00000365628 92 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 Y_RNA.465-201ENST00000384293 102 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 U8.11-201ENST00000384699 133 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 U8.12-201ENST00000384701 133 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 DHFRP6-201ENST00000401776 268 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 RN7SKP263-201ENST00000411194 309 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AL035423.1-201ENST00000420331 213 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AL137014.1-201ENST00000420490 1226 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 RPL7P30-201ENST00000420888 709 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 RPL31P12-201ENST00000422587 358 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 BX679664.1-201ENST00000434429 253 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AL009048.1-201ENST00000450437 298 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 CFTRP1-201ENST00000456646 183 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 U8.18-201ENST00000459285 133 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AP001992.1-205ENST00000462248 379 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 RPS4XP10-201ENST00000465034 731 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 MTND1P16-201ENST00000465177 898 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AC022861.1-201ENST00000522981 663 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 SNRPGP16-201ENST00000533275 226 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AL132857.1-201ENST00000555180 708 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AL512347.1-201ENST00000566420 503 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 MTCO2P2-201ENST00000591258 225 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AC020914.6-201ENST00000594327 272 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AC106052.1-201ENST00000608029 497 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A1O00337 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A1O00337 AC107075.1-201ENST00000613695 314 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 U4.6-201ENST00000621618 127 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AL353748.2-201ENST00000622148 471 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 AC090772.4-201ENST00000623599 362 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 OR4G3P-201ENST00000633500 913 ntBASIC3.34□□□□□ -1.87
SLC28A1O00337 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC28A1O00337 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms