Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC234781.2-201ENST00000426370 994 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 ISCA1P2-201ENST00000438679 421 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AL772161.1-201ENST00000439130 476 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 HMGB3P11-201ENST00000440127 604 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 MTND2P20-201ENST00000440805 661 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AL049714.1-201ENST00000466686 347 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC010618.1-201ENST00000469924 477 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 RN7SL594P-201ENST00000470590 287 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC069528.1-202ENST00000482888 637 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 RPL7P23-201ENST00000493874 747 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC114981.1-201ENST00000503897 678 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC109464.2-201ENST00000510242 943 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 PHBP14-201ENST00000512887 367 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 RN7SKP31-201ENST00000516354 278 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC103783.1-201ENST00000520506 373 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 MRPL49P2-201ENST00000521066 465 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 MTND1P36-201ENST00000522384 936 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 OR7K1P-201ENST00000546439 926 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC137768.1-201ENST00000549998 553 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 MIR3609-201ENST00000582661 80 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC023158.2-201ENST00000614876 543 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AL596245.1-201ENST00000618994 362 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 U4.6-201ENST00000621618 127 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AP000676.4-201ENST00000624659 623 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC093908.1-201ENST00000623125 8092 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 snoZ40.1-201ENST00000364540 72 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 MIR1290-201ENST00000408735 78 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 RNA5SP44-201ENST00000410446 133 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 MRPS36P1-201ENST00000421291 307 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC073143.1-201ENST00000436316 395 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 RPL23AP22-201ENST00000437556 453 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 RPL26P6-201ENST00000440913 438 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC097262.1-201ENST00000452559 548 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 TRGVB-201ENST00000453257 471 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC007967.1-201ENST00000455422 1159 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 RPL23AP67-201ENST00000465341 474 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC108734.3-201ENST00000481241 1165 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC104629.1-201ENST00000494226 508 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC114322.1-201ENST00000506771 926 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 SUMO2P5-201ENST00000506790 245 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 HMGB1P28-201ENST00000507778 552 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 CASP1P1-201ENST00000526345 212 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 LRRC6P1-201ENST00000532188 885 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 OR4H12P-201ENST00000556269 907 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC104072.1-201ENST00000568817 668 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC023575.1-201ENST00000580510 358 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC092354.2-201ENST00000607786 514 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC009237.15-201ENST00000610252 501 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 DUXAP10-204ENST00000612052 616 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC243773.3-201ENST00000613270 256 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC090772.4-201ENST00000623599 362 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 FAM35CP-201ENST00000554755 2470 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 API5P2-201ENST00000397055 1498 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AL356473.1-201ENST00000406203 1408 ntBASIC2.5□□□□□ -2.01
SMKR1H3BMG3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SMKR1H3BMG3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms