Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Speer3W4VSP1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Speer3W4VSP1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Gm715-201ENSMUST00000117865 831 ntBASIC16.68■□□□□ 0.26
Speer3W4VSP1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.68■□□□□ 0.26
Speer3W4VSP1 Gm44882-201ENSMUST00000205702 802 ntBASIC16.68■□□□□ 0.26
Speer3W4VSP1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.68■□□□□ 0.26
Speer3W4VSP1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Speer3W4VSP1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.67■□□□□ 0.26
Speer3W4VSP1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Gm6754-201ENSMUST00000117124 913 ntBASIC16.67■□□□□ 0.26
Speer3W4VSP1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Speer3W4VSP1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.66■□□□□ 0.26
Speer3W4VSP1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.66■□□□□ 0.26
Speer3W4VSP1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Speer3W4VSP1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 CT009738.1-201ENSMUST00000219031 809 ntBASIC16.65■□□□□ 0.26
Speer3W4VSP1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Speer3W4VSP1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms