Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb1S4R1E0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb1S4R1E0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.85□□□□□ -0.03
H2afb1S4R1E0 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb1S4R1E0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb1S4R1E0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb1S4R1E0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.83□□□□□ -0.04
H2afb1S4R1E0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms