Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Herpud1Q9JJK5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herpud1Q9JJK5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herpud1Q9JJK5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gm27463-201ENSMUST00000183569 57 ntBASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herpud1Q9JJK5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herpud1Q9JJK5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herpud1Q9JJK5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms