Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mbd3l1Q9D9H3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Mbd3l1Q9D9H3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mbd3l1Q9D9H3 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.21□□□□□ -0.14
Mbd3l1Q9D9H3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mbd3l1Q9D9H3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.21□□□□□ -0.14
Mbd3l1Q9D9H3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mbd3l1Q9D9H3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 App-207ENSMUST00000227737 2827 ntBASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mbd3l1Q9D9H3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mbd3l1Q9D9H3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.17□□□□□ -0.14
Mbd3l1Q9D9H3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms