Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Gm21559-201ENSMUST00000220638 855 ntBASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Gm8587-201ENSMUST00000076538 843 ntBASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf3c6Q9D8P7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf3c6Q9D8P7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Gm18032-201ENSMUST00000222541 538 ntBASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf3c6Q9D8P7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gtf3c6Q9D8P7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gtf3c6Q9D8P7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Gm22697-201ENSMUST00000175194 63 ntBASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Gm18101-201ENSMUST00000215769 548 ntBASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms