Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf8Q8VC56 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf8Q8VC56 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.8■□□□□ 0.12
Rnf8Q8VC56 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Gm13559-201ENSMUST00000120476 863 ntBASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Gm43799-201ENSMUST00000201845 579 ntBASIC15.79■□□□□ 0.12
Rnf8Q8VC56 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf8Q8VC56 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Gm2274-201ENSMUST00000184539 609 ntBASIC15.78■□□□□ 0.12
Rnf8Q8VC56 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Gm7791-201ENSMUST00000219066 539 ntBASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf8Q8VC56 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf8Q8VC56 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms