Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Gm18669-201ENSMUST00000216049 778 ntBASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chrna3Q8R4G9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chrna3Q8R4G9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna3Q8R4G9 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Gm28033-201ENSMUST00000184224 96 ntBASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna3Q8R4G9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Gm44430-201ENSMUST00000203376 995 ntBASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna3Q8R4G9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna3Q8R4G9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms