Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Ubqln1Q8R317 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubqln1Q8R317 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ubqln1Q8R317 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ubqln1Q8R317 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.49■□□□□ 0.07
Ubqln1Q8R317 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms