Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.73■□□□□ 0.43
Trim68Q8K243 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.73■□□□□ 0.43
Trim68Q8K243 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim68Q8K243 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim68Q8K243 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim68Q8K243 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.72■□□□□ 0.43
Trim68Q8K243 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim68Q8K243 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim68Q8K243 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim68Q8K243 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim68Q8K243 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim68Q8K243 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Gm12644-201ENSMUST00000119935 606 ntBASIC17.71■□□□□ 0.43
Trim68Q8K243 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim68Q8K243 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trim68Q8K243 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.71■□□□□ 0.43
Trim68Q8K243 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.71■□□□□ 0.43
Trim68Q8K243 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trim68Q8K243 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim68Q8K243 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim68Q8K243 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Trim68Q8K243 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Haglr-201ENSMUST00000100000 2085 ntBASIC17.7■□□□□ 0.42
Trim68Q8K243 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.7■□□□□ 0.42
Trim68Q8K243 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim68Q8K243 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.7■□□□□ 0.42
Trim68Q8K243 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim68Q8K243 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Idnk-204ENSMUST00000226010 1898 ntBASIC17.69■□□□□ 0.42
Trim68Q8K243 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.69■□□□□ 0.42
Trim68Q8K243 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim68Q8K243 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim68Q8K243 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim68Q8K243 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim68Q8K243 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms