Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 KRT16P4-201ENST00000453883 522 ntBASIC27.36■■□□□ 1.97
UBR1Q8IWV7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 AC138894.3-201ENST00000603787 634 ntBASIC27.36■■□□□ 1.97
UBR1Q8IWV7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 AL662844.1-201ENST00000546340 181 ntBASIC27.35■■□□□ 1.97
UBR1Q8IWV7 AC074051.2-201ENST00000565115 352 ntBASIC27.35■■□□□ 1.97
UBR1Q8IWV7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 MIR3917-201ENST00000580971 93 ntBASIC27.35■■□□□ 1.97
UBR1Q8IWV7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
UBR1Q8IWV7 AC009237.14-201ENST00000609975 1594 ntBASIC27.34■■□□□ 1.97
UBR1Q8IWV7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 RNA5SP419-201ENST00000515908 135 ntBASIC27.34■■□□□ 1.97
UBR1Q8IWV7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
UBR1Q8IWV7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 AL121912.1-201ENST00000603683 238 ntBASIC27.33■■□□□ 1.97
UBR1Q8IWV7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC27.33■■□□□ 1.97
UBR1Q8IWV7 LINC00167-201ENST00000530583 1419 ntBASIC27.33■■□□□ 1.96
UBR1Q8IWV7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC27.33■■□□□ 1.96
UBR1Q8IWV7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
UBR1Q8IWV7 AL121772.3-201ENST00000610840 674 ntBASIC27.33■■□□□ 1.96
UBR1Q8IWV7 TP73-AS1-207ENST00000624167 988 ntBASIC27.33■■□□□ 1.96
UBR1Q8IWV7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC27.32■■□□□ 1.96
UBR1Q8IWV7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 AC079834.2-201ENST00000609776 1949 ntBASIC27.31■■□□□ 1.96
UBR1Q8IWV7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 PENK-208ENST00000523051 772 ntTSL 5 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC27.31■■□□□ 1.96
UBR1Q8IWV7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 AC104819.1-201ENST00000504587 486 ntBASIC27.3■■□□□ 1.96
UBR1Q8IWV7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 AL691432.2-201ENST00000607222 2038 ntBASIC27.3■■□□□ 1.96
UBR1Q8IWV7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 AL023284.2-201ENST00000405850 579 ntBASIC27.3■■□□□ 1.96
UBR1Q8IWV7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC27.3■■□□□ 1.96
UBR1Q8IWV7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms