Protein–RNA interactions for Protein: Q8CCG1

Zc2hc1c, Zinc finger C2HC domain-containing protein 1C, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc2hc1cQ8CCG1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm6443-201ENSMUST00000203599 874 ntBASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm6376-201ENSMUST00000209407 580 ntBASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Zc2hc1cQ8CCG1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm25745-201ENSMUST00000174945 133 ntBASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Zc2hc1cQ8CCG1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Rps4l-201ENSMUST00000071745 943 ntBASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Zc2hc1cQ8CCG1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm7862-201ENSMUST00000121461 292 ntBASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm18733-201ENSMUST00000173950 856 ntBASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm43514-201ENSMUST00000198852 424 ntBASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Zc2hc1cQ8CCG1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.53■□□□□ 0.24
Zc2hc1cQ8CCG1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms