Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtp1Q8C8C1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Gm11025-201ENSMUST00000140773 466 ntBASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtp1Q8C8C1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtp1Q8C8C1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Rtp1Q8C8C1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Mir6956-201ENSMUST00000183598 62 ntBASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtp1Q8C8C1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtp1Q8C8C1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.58■□□□□ 0.57
Rtp1Q8C8C1 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.58■□□□□ 0.57
Rtp1Q8C8C1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rtp1Q8C8C1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms