Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim35Q8C006 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.07■□□□□ 0.32
Trim35Q8C006 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim35Q8C006 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.06■□□□□ 0.32
Trim35Q8C006 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm15565-201ENSMUST00000118890 427 ntBASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm37858-201ENSMUST00000192759 1231 ntBASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm44038-201ENSMUST00000203952 889 ntBASIC17.06■□□□□ 0.32
Trim35Q8C006 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim35Q8C006 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Trim35Q8C006 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim35Q8C006 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm37024-201ENSMUST00000192224 868 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm8969-201ENSMUST00000199694 526 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm3375-201ENSMUST00000203929 796 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 AC129017.2-201ENSMUST00000226118 1284 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm5417-201ENSMUST00000079706 384 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trim35Q8C006 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim35Q8C006 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.05■□□□□ 0.32
Trim35Q8C006 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.04■□□□□ 0.32
Trim35Q8C006 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Gm17838-201ENSMUST00000205872 876 ntBASIC17.04■□□□□ 0.32
Trim35Q8C006 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms