Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Smco3Q8BQM7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Gm11927-201ENSMUST00000118472 759 ntBASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Gm11643-201ENSMUST00000119578 864 ntBASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Mtag2-201ENSMUST00000058665 714 ntBASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smco3Q8BQM7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 AV356131-201ENSMUST00000206201 750 ntBASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smco3Q8BQM7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smco3Q8BQM7 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.52□□□□□ -0.24
Smco3Q8BQM7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smco3Q8BQM7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smco3Q8BQM7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smco3Q8BQM7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Smco3Q8BQM7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Gm6576-201ENSMUST00000169678 883 ntBASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smco3Q8BQM7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Gm7290-201ENSMUST00000104990 617 ntBASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Gm12918-201ENSMUST00000120234 636 ntBASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Gm15710-201ENSMUST00000121821 636 ntBASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Gm5075-201ENSMUST00000196916 622 ntBASIC13.51□□□□□ -0.25
Smco3Q8BQM7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms